RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 APCDD1LQ8NCL9 501 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 CLEC7AQ9BXN2 247 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 OR51M1Q9H341 326 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ARFGEF3Q5TH69 2177 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ZCCHC24Q8N2G6 241 aaKnown RBP9.04□□□□□ -0.96
CLN8-201ENST00000331222 VGLL1Q99990 258 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ODAMA1E959 279 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 NPIPB3Q92617 1050 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 DNAJC4Q9NNZ3 241 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 LOC285556D6RIA3 1793 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 DYSFO75923 2080 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 MGST3O14880 152 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 PSG9Q00887 426 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 COTL1Q14019 142 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 KIR3DL3Q8N743 410 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ST6GALNAC6Q969X2 333 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 MARVELD1Q9BSK0 173 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ZNF430Q9H8G1 570 aaPredicted RBP9.04□□□□□ -0.96
CLN8-201ENST00000331222 HKR1P10072 659 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLN8-201ENST00000331222 C10orf128Q5T292 105 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 SCARF2Q96GP6 870 aaPredicted RBP9.03□□□□□ -0.96
CLN8-201ENST00000331222 PGLYRP1O75594 196 aaPredicted RBP9.03□□□□□ -0.96
CLN8-201ENST00000331222 FXYD7P58549 80 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 FAM74A3Q4VXF1 159 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.964e-15■■■■□ 21.5
CLN8-201ENST00000331222 DLL3Q9NYJ7 618 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 LINC00527Q9UJ94 153 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 FABP2P12104 132 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 HOXA6P31267 233 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 COLCA1Q6ZS62 124 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 KIR2DL4Q99706 377 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 UBR3Q6ZT12 1888 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 GBF1Q92538 1859 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
CLN8-201ENST00000331222 TMEM136Q6ZRR5 245 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 FAM89BQ8N5H3 189 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 HMSDA8MTL9 139 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 TMEM70Q9BUB7 260 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
CLN8-201ENST00000331222 CD33P20138 364 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 SRIP30626 198 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 RNF133Q8WVZ7 376 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 RAB24Q969Q5 203 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 AMELYQ99218 206 aa9.03□□□□□ -0.96
CLN8-201ENST00000331222 ATRXP46100 2492 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 IGHV3-73A0A0B4J1V6 119 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 C1QAP02745 245 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 NUTF2P61970 127 aaKnown RBP9.02□□□□□ -0.96
CLN8-201ENST00000331222 ABHD17AQ96GS6 310 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 V9GYH0 126 aa9.02□□□□□ -0.96
CLN8-201ENST00000331222 CHD3Q12873 2000 aaKnown RBP9.02□□□□□ -0.96
CLN8-201ENST00000331222 LNP1A1A4G5 178 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 MUC1P15941 1255 aaPredicted RBP9.02□□□□□ -0.97
CLN8-201ENST00000331222 SELENOTP62341 195 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 CD160O95971 181 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 TSPOP30536 169 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 SIRT4Q9Y6E7 314 aaPredicted RBP9.02□□□□□ -0.97
CLN8-201ENST00000331222 TCRBV4S1A1TA0A5B7 111 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 FOXH1O75593 365 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 UBE2V2Q15819 145 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 NRN1LQ496H8 165 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 GPR146Q96CH1 333 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 CHRNA10Q9GZZ6 450 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 GP6Q9HCN6 339 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 JKAMPQ9P055 326 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 IGKV1-8A0A0C4DH67 115 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 RRHO14718 337 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 TYMSP04818 313 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
CLN8-201ENST00000331222 PLXND1Q9Y4D7 1925 aa9.02□□□□□ -0.97
CLN8-201ENST00000331222 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 SYNGR3O43761 229 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 LDLRAD2Q5SZI1 272 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 MMD2Q8IY49 270 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 GCSAMQ8N6F7 178 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 WDR34Q96EX3 536 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 LRRK1Q38SD2 2015 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 CXorf65A6NEN9 183 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 H0YL77 283 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 APOMO95445 188 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 COX6A1P12074 109 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 EFNB1P98172 346 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 ZBTB34Q8NCN2 500 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 PTPRDP23468 1912 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 RPS11P62280 158 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLN8-201ENST00000331222 Q71RC1 249 aaPredicted RBP9.01□□□□□ -0.97
CLN8-201ENST00000331222 HOGA1Q86XE5 327 aa9.01□□□□□ -0.97
CLN8-201ENST00000331222 SELENOHQ8IZQ5 122 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms