RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TPTE2P1Q5T6R2 138 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 ZNF826PQ6ZT77 177 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 SIGLECL1Q8N7X8 197 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 Q8NFD4 153 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 TXN2Q99757 166 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
VMA21-201ENST00000330374 WNT9BO14905 357 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 MT-CO3P00414 261 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 RAB7AP51149 207 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 FXYD3Q14802 87 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 ALKBH6Q3KRA9 238 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 KRTCAP3Q53RY4 240 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 ERASQ7Z444 233 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 OR8I2Q8N0Y5 310 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
VMA21-201ENST00000330374 QTRT1Q9BXR0 403 aaKnown RBP6.59□□□□□ -1.35
VMA21-201ENST00000330374 HSPB7Q9UBY9 170 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 ARFGEF3Q5TH69 2177 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 TNFSF13O75888 250 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CYC1P08574 325 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 HTD2P86397 168 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 RIPPLY2Q5TAB7 128 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 COLCA1Q6ZS62 124 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 SAXO1Q8IYX7 474 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 C5orf30Q96GV9 206 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 HINT2Q9BX68 163 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CADP27708 2225 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 ZFHX4Q86UP3 3567 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 TNCP24821 2201 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 MLNRO43193 412 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CFIP05156 583 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CD1BP29016 333 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CHRNB4P30926 498 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 FOLR3P41439 243 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 AMTP48728 403 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 LINC00310P59036 64 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 SPATA31B1PQ5VZV4 182 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 FAM19A2Q8N3H0 131 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 PSG11Q9UQ72 335 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 DIRC3C9JPN6 131 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 M0QZK8 103 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 RRHO14718 337 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 PDE6DO43924 150 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 CLDN14O95500 239 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 RELQ04864 619 aaPredicted RBP6.59□□□□□ -1.35
VMA21-201ENST00000330374 SRSF7Q16629 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
VMA21-201ENST00000330374 Q6P435 159 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 TMEM144Q7Z5S9 345 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 SCCPDHQ8NBX0 429 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 DCTN5Q9BTE1 182 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 NAT8BQ9UHF3 227 aa6.59□□□□□ -1.35
VMA21-201ENST00000330374 MUC3AQ02505 3323 aa6.59□□□□□ -1.36
VMA21-201ENST00000330374 RNF212BA8MTL3 300 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 PSPNO60542 156 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 EPHA8P29322 1005 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 SSTR5P35346 364 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 GNG10P50151 68 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 EDDM3AQ14507 147 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ACSF3Q4G176 576 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 GALMQ96C23 342 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 SERTAD4Q9NUC0 356 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 HCFC1P51610 2035 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 TIMP3P35625 211 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 RPL31P62899 125 aaKnown RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 ATP6V1FQ16864 119 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 MRPL54Q6P161 138 aaKnown RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 Q6ZN92 141 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ROS1P08922 2347 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 CEP192Q8TEP8 1941 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 FAM90A27PA6NNH2 459 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 PMS2P5A8MQ11 134 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 C12orf77C9JDV5 145 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 TOX3O15405 576 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 SRFP11831 508 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 LHX2P50458 406 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 CATR1Q13166 79 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ZNF497Q6ZNH5 498 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 WDR86Q86TI4 376 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 DOLPP1Q86YN1 238 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 UHRF2Q96PU4 802 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 GCM1Q9NP62 436 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 TBL2Q9Y4P3 447 aaKnown RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 YTHDF2Q9Y5A9 579 aaKnown RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 ABCA1O95477 2261 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 PIGBOS1A0A0B4J2F0 54 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 LINC00473A8K010 186 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 FCGR3BO75015 233 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 FOXH1O75593 365 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 NEURL1O76050 574 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 HBZP02008 142 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 CELA3BP08861 270 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 MRPS11P82912 194 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms