RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PRO1933Q9H354 126 aa12.73□□□□□ -0.37
BRCC3-201ENST00000330045 PATZ1Q9HBE1 687 aaKnown RBP12.73□□□□□ -0.37
BRCC3-201ENST00000330045 KCNIP2Q9NS61 270 aa12.73□□□□□ -0.37
BRCC3-201ENST00000330045 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 IGHV1-18A0A0C4DH31 117 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 AQP7O14520 342 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 RRHO14718 337 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 YPEL1O60688 119 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 NDUFB4O95168 129 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 OPRK1P41145 380 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 ERVK-16P61578 105 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 VKORC1L1Q8N0U8 176 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 OR52E5Q8NH55 327 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 Q8TCH9 128 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 YPEL2Q96QA6 119 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 A0A1B0GWJ7 208 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 TMPRSS2O15393 492 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 GZMBP10144 247 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 DDTP30046 118 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 PDLIM4P50479 330 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 FAM90A1Q86YD7 464 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
BRCC3-201ENST00000330045 SRRM5B3KS81 715 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 MGST3O14880 152 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 CD99P14209 185 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.37
BRCC3-201ENST00000330045 PDLIM3Q53GG5 364 aaPredicted RBP12.71□□□□□ -0.37
BRCC3-201ENST00000330045 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 AURKAIP1Q9NWT8 199 aaPredicted RBP12.71□□□□□ -0.37
BRCC3-201ENST00000330045 F6UZH7 168 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 RBFOX2O43251 390 aaKnown RBP eCLIP12.71□□□□□ -0.37
BRCC3-201ENST00000330045 IGHV3-13P01766 116 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 IGHV3-7P01780 117 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 LCN2P80188 198 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 RELBQ01201 579 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 FAM78BQ5VT40 261 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 S1PR3Q99500 378 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 MS4A5Q9H3V2 200 aa12.71□□□□□ -0.37
BRCC3-201ENST00000330045 ZZEF1O43149 2961 aa12.71□□□□□ -0.38
BRCC3-201ENST00000330045 PRSS46E5RG02 174 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 GFRA3O60609 400 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF134P52741 427 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 TMPRSS3P57727 454 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 CR1LQ2VPA4 569 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 SDSLQ96GA7 329 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 MGST2Q99735 147 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 ACACAQ13085 2346 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 A0A087X0M5 115 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 TRAV3A0A0B4J244 114 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 A0A1B0GX30 115 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 K7EM74 188 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 HCFC1P51610 2035 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 LOXL3P58215 753 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 GGTLC1Q9BX51 225 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 OPN3Q9H1Y3 402 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-201ENST00000330045 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-201ENST00000330045 PXMP4Q9Y6I8 212 aa12.7□□□□□ -0.38
BRCC3-201ENST00000330045 IGHV3OR15-7A0A075B7D8 119 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 IL3RAP26951 378 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 REC114Q7Z4M0 266 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 ZNRF1Q8ND25 227 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 TMEM140Q9NV12 185 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 F2RL2O00254 374 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 KLK10O43240 276 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 CXorf1O96002 111 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 LRP11Q86VZ4 500 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 GCSAMQ8N6F7 178 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 TXNDC17Q9BRA2 123 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 SPTBN4Q9H254 2564 aa12.69□□□□□ -0.38
BRCC3-201ENST00000330045 A0A0U1RQK1 487 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF320A2RRD8 509 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 PGPEP1LA6NFU8 196 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 GCGP01275 180 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 CFHR2P36980 270 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 PRSS8Q16651 343 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 UNQ6494/PRO21346Q6UXR6 183 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 BTF3L4Q96K17 158 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 TCF19Q9Y242 345 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 TRAV17A0A0B4J275 112 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 TNFSF13O75888 250 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 KIR2DS2P43631 304 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms