RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CD177Q8N6Q3 437 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 SARAFQ96BY9 339 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 SAMD10Q9BYL1 202 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM242Q9NWH2 141 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 MED13LQ71F56 2210 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 MGST1P10620 155 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 NDUFB7P17568 137 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 SSX2Q16385 188 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 BAGE3Q86Y29 109 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 BAGE2Q86Y30 109 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 DEFB124Q8NES8 71 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 FAM103A1Q9BTL3 118 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 SP9P0CG40 484 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 GATA2P23769 480 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 TCF19Q9Y242 345 aa10.72□□□□□ -0.69
HMGCS1-201ENST00000325110 HPRT1P00492 218 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 CBLN1P23435 193 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 DUTP33316 252 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 BRWD1-AS2P59051 145 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 HTD2P86397 168 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 TRIP6Q15654 476 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 SPATA31B1PQ5VZV4 182 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 MS4A10Q96PG2 267 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 SLC31A2O15432 143 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 ADH4P08319 380 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 NPPCP23582 126 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 ITLN1Q8WWA0 313 aa10.71□□□□□ -0.69
HMGCS1-201ENST00000325110 TNRC18O15417 2968 aaPredicted RBP10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 MGAQ8IWI9 3026 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 OR10J4P0C629 311 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 GZMBP10144 247 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 NPY1RP25929 384 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 KIR2DL2P43627 348 aaPredicted RBP10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 SELENOVP59797 346 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 LINC01551Q86U37 167 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 TMEM256Q8N2U0 113 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 OR10G8Q8NGN5 311 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 LURAP1Q96LR2 239 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 SPRY4Q9C004 299 aa10.71□□□□□ -0.7
HMGCS1-201ENST00000325110 APC2O95996 2303 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 CDX4O14627 284 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 PDE6DO43924 150 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 G0S2P27469 103 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 RPL29P47914 159 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 SPCS3P61009 180 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 PSG5Q15238 335 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 C11orf53Q8IXP5 236 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 REG1BP48304 166 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 RPL31P62899 125 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 MRPS11P82912 194 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 TOMM20LQ6UXN7 152 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 PCSK5Q92824 1860 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 A8MXE2 369 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 IER3P46695 156 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 PAX5Q02548 391 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 OR5I1Q13606 314 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 BHLHA15Q7RTS1 189 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 CALYQ9NYX4 217 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 ZNRD1Q9P1U0 126 aa10.7□□□□□ -0.7
HMGCS1-201ENST00000325110 HCFC1P51610 2035 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 SPTBN1Q01082 2364 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 JOSD1Q15040 202 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 MORN2Q502X0 79 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 REC114Q7Z4M0 266 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 OR4S2Q8NH73 311 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 CCL13Q99616 98 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 RPH3ALQ9UNE2 315 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 OTOGLQ3ZCN5 2332 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 TRAV17A0A0B4J275 112 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 M0R296 226 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 FCN1O00602 326 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 MGST3O14880 152 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 MT-CO2P00403 227 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 FXYD3Q14802 87 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 UTF1Q5T230 341 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 DUX4L9Q6RFH8 374 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 ZNF664Q8N3J9 261 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 SLC24A4Q8NFF2 622 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 SEPSECSQ9HD40 501 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 TNRC6AQ8NDV7 1962 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 PLXNB1O43157 2135 aa10.69□□□□□ -0.7
HMGCS1-201ENST00000325110 IGHV1-18A0A0C4DH31 117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms