RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 FCN1O00602 326 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
PRPF3-201ENST00000324862 HRASP01112 189 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 IL15RAQ13261 267 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 RAB32Q13637 225 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 MRGPRG-AS1Q2M3A8 158 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 F8P00451 2351 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 E7EUB6 86 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 IGHV4-59P01825 116 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 TMEM11P17152 192 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 RELBQ01201 579 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 PSG5Q15238 335 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 PLSCR3Q9NRY6 295 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 MAST4O15021 2626 aa12.2□□□□□ -0.46
PRPF3-201ENST00000324862 TRAV14DV4A0A0A6YYC5 116 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 PITX3O75364 302 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 OR2F2O95006 317 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 MBPP02686 304 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 GIPP09681 153 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 NKX2-5P52952 324 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 S100A10P60903 97 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 Q8N6K4 173 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 OR11H4Q8NGC9 324 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 OR2T10Q8NGZ9 312 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 OR1S1Q8NH92 325 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 H0YIZ8 118 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 BRS3P32247 399 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 SMCO1Q147U7 214 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 POU2AF1Q16633 256 aa12.19□□□□□ -0.46
PRPF3-201ENST00000324862 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 PUSL1Q8N0Z8 303 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
PRPF3-201ENST00000324862 KBTBD11O94819 623 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-201ENST00000324862 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 EBI3Q14213 229 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 CLEC9AQ6UXN8 241 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 NMES1Q9C002 83 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-201ENST00000324862 NF1P21359 2839 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 A0A1B0GU03 582 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 APELAP0DMC3 54 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 SRSF4Q08170 494 aaKnown RBP12.18□□□□□ -0.46
PRPF3-201ENST00000324862 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 OR5AC2Q9NZP5 309 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 SIGLEC9Q9Y336 463 aa12.18□□□□□ -0.46
PRPF3-201ENST00000324862 NSD1Q96L73 2696 aaPredicted RBP12.17□□□□□ -0.46
PRPF3-201ENST00000324862 UPK2O00526 184 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 NBR2O15453 112 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 CRYGBP07316 175 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 LGALS7P47929 136 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 UBE2KP61086 200 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
PRPF3-201ENST00000324862 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 BET1LQ9NYM9 111 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 RRHO14718 337 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 ATG12O94817 140 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 MPC2O95563 127 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 RAP2BP61225 183 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 GNB1P62873 340 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 PLGLAQ15195 96 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
PRPF3-201ENST00000324862 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
PRPF3-201ENST00000324862 A0A1B0GW64 132 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 INAFM1C9JVW0 142 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 K7EPK0 472 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TMEM50AO95807 157 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-201ENST00000324862 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 FAM71E2Q8N5Q1 922 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 HINT2Q9BX68 163 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
PRPF3-201ENST00000324862 HOXA3O43365 443 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-201ENST00000324862 SSSCA1O60232 199 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 IAPPP10997 89 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 IER3P46695 156 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 ID3Q02535 119 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 PPP1R27Q86WC6 154 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 Q8N9W7 124 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms