RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 HRASP01112 189 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 AMBPP02760 352 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 PRR30Q53SZ7 412 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 SPRNQ5BIV9 151 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 UNQ6494/PRO21346Q6UXR6 183 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 TGIF2LYQ8IUE0 185 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 MBD3L2Q8NHZ7 208 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 NEIL1Q96FI4 390 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-202ENST00000324554 OR5B12Q96R08 314 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 IGHV3OR15-7A0A075B7D8 119 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 PPP5D1E7EU14 171 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 MGST3O14880 152 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 AARDQ4LEZ3 155 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 DNLZQ5SXM8 178 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 OR1P1Q8NH06 330 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 C14orf144Q96I85 54 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 PRO1933Q9H354 126 aa13.3□□□□□ -0.28
USHBP1-202ENST00000324554 HCFC1P51610 2035 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 C11orf94C9JXX5 98 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 K7ENP7 123 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 HPRT1P00492 218 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 CDC34P49427 236 aaPredicted RBP13.29□□□□□ -0.28
USHBP1-202ENST00000324554 ZNF83P51522 516 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 PRSS8Q16651 343 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 CR1LQ2VPA4 569 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 OR5T1Q8NG75 326 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 Q8TCH9 128 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 OR6C3Q9NZP0 311 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 TLN1Q9Y490 2541 aaKnown RBP13.29□□□□□ -0.28
USHBP1-202ENST00000324554 YPEL1O60688 119 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 CRYAAP02489 173 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 CFHR2P36980 270 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 LOXL3P58215 753 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 SSX9Q7RTT3 188 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 ZNRF1Q8ND25 227 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
USHBP1-202ENST00000324554 AURKAIP1Q9NWT8 199 aaPredicted RBP13.29□□□□□ -0.28
USHBP1-202ENST00000324554 PCNX1Q96RV3 2341 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 ADGRG4Q8IZF6 3080 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 C17orf112F2Z3M2 114 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 M0R1X1 148 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 IGHV3-13P01766 116 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 IGHV3-7P01780 117 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 ZNF134P52741 427 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 RPL39P5Q59GN2 51 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 Q8NA96 180 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 PPP1R35Q8TAP8 253 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 FAM234AQ9H0X4 552 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 M0R1B8 84 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 CRYABP02511 175 aaKnown RBP13.28□□□□□ -0.28
USHBP1-202ENST00000324554 CD1BP29016 333 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 ATP5G3P48201 142 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 UBE2G2P60604 165 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
USHBP1-202ENST00000324554 PRAMEF5Q5TYX0 476 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 MOGAT3Q86VF5 341 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 FAM216AQ8WUB2 273 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 ANAPC16Q96DE5 110 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 DIRC2Q96SL1 478 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 DERL1Q9BUN8 251 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 IFI27L2Q9H2X8 130 aa13.28□□□□□ -0.28
USHBP1-202ENST00000324554 NCOR2Q9Y618 2525 aa13.27□□□□□ -0.28
USHBP1-202ENST00000324554 SMG1Q96Q15 3661 aaKnown RBP13.27□□□□□ -0.28
USHBP1-202ENST00000324554 CADP27708 2225 aa13.27□□□□□ -0.28
USHBP1-202ENST00000324554 F2RL2O00254 374 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 GGCTO75223 188 aaKnown RBP13.27□□□□□ -0.29
USHBP1-202ENST00000324554 GZMBP10144 247 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 CHRNA7P36544 502 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 EDDM3BP56851 147 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 PKIAP61925 76 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 GNB1P62873 340 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 COA6Q5JTJ3 125 aaKnown RBP13.27□□□□□ -0.29
USHBP1-202ENST00000324554 ZNF474Q6S9Z5 364 aaPredicted RBP13.27□□□□□ -0.29
USHBP1-202ENST00000324554 VKORC1L1Q8N0U8 176 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 OR2T10Q8NGZ9 312 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 TMEM170AQ8WVE7 144 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 TMEM37Q8WXS4 190 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 MEGF10Q96KG7 1140 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 FUT9Q9Y231 359 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 VENTXO95231 258 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 FAM3BP58499 235 aaPredicted RBP13.27□□□□□ -0.29
USHBP1-202ENST00000324554 JOSD1Q15040 202 aaPredicted RBP13.27□□□□□ -0.29
USHBP1-202ENST00000324554 OR5R1Q8NH85 324 aa13.27□□□□□ -0.29
USHBP1-202ENST00000324554 TET2Q6N021 2002 aaPredicted RBP13.26□□□□□ -0.29
USHBP1-202ENST00000324554 RBFOX2O43251 390 aaKnown RBP eCLIP13.26□□□□□ -0.29
USHBP1-202ENST00000324554 DDTP30046 118 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 KLF3P57682 345 aaPredicted RBP13.26□□□□□ -0.29
USHBP1-202ENST00000324554 SPCS3P61009 180 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 ACTL10Q5JWF8 245 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 TIMM23BQ5SRD1 257 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 LINC01551Q86U37 167 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
USHBP1-202ENST00000324554 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms