RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OPN1MW3P0DN78 364 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 IGKV1-13P0DP09 117 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 FABP4P15090 132 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 PDLIM4P50479 330 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 FXYD4P59646 89 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-202ENST00000324340 TMEM200BQ69YZ2 307 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 BTNL3Q6UXE8 466 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 SGPP2Q8IWX5 399 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 OR10A7Q8NGE5 316 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 OR52L2PQ8NGH6 319 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 OR52M1Q8NGK5 317 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 C8orf46Q8TAG6 207 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 UBALD1Q8TB05 177 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 ABHD14BQ96IU4 210 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 FAM210BQ96KR6 192 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 GAL3ST2Q9H3Q3 398 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 TRAV1-1A0A0B4J248 108 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 CLDN34H7C241 214 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 NDUFS8O00217 210 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 ITGB1BP1O14713 200 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 PHOX2AO14813 284 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 YPEL1O60688 119 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 PRH1P02810 166 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 TRGC1P0CF51 173 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 GZMBP10144 247 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 GNRHRP30968 328 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF266Q14584 549 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 SLC9A3R2Q15599 337 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 WDR25Q64LD2 544 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF429Q86V71 674 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 FAM219AQ8IW50 185 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 OR10V1Q8NGI7 309 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 RFESDQ8TAC1 157 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 H1FXQ92522 213 aaKnown RBP10.48□□□□□ -0.73
DDX39A-202ENST00000324340 NINJ1Q92982 152 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 TOMM40LQ969M1 308 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 YPEL2Q96QA6 119 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
DDX39A-202ENST00000324340 PUS1Q9Y606 427 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDX39A-202ENST00000324340 KIAA2026Q5HYC2 2103 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 COL12A1Q99715 3063 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 CYSRT1A8MQ03 144 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 DLEU1O43261 78 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 CXCL1P09341 107 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 PI3P19957 117 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 ATP5J2P56134 94 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 DLX6P56179 175 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 KRTAP10-9P60411 292 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 ERVFC1-1P60608 527 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 RND3P61587 244 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 GNMTQ14749 295 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 MSMO1Q15800 293 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 MORN2Q502X0 79 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF664Q8N3J9 261 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 LY6G5BQ8NDX9 201 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 C10orf105Q8TEF2 133 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 NRGNQ92686 78 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 BPESC1Q9GZL8 116 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 PARP12Q9H0J9 701 aaKnown RBP10.47□□□□□ -0.73
DDX39A-202ENST00000324340 PRO1933Q9H354 126 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 SLC2A9Q9NRM0 540 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 GOLT1BQ9Y3E0 138 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 MMP24Q9Y5R2 645 aa10.47□□□□□ -0.73
DDX39A-202ENST00000324340 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 VWC2LB2RUY7 222 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 CYB5BO43169 146 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 IGLV2-14P01704 120 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 TRGC2P03986 189 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 OR13C7P0DN81 318 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 PPP1CCP36873 323 aaKnown RBP10.46□□□□□ -0.74
DDX39A-202ENST00000324340 PIGPP57054 158 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 DSCR9P59020 149 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 IQCJQ1A5X6 159 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF818PQ6ZRF7 136 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 ABHD5Q8WTS1 349 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 FAM168AQ92567 244 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.74
DDX39A-202ENST00000324340 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 AGMATQ9BSE5 352 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 GSKIPQ9P0R6 139 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 RPUSD1Q9UJJ7 312 aaKnown RBP10.46□□□□□ -0.74
DDX39A-202ENST00000324340 LRBAP50851 2863 aa10.46□□□□□ -0.74
DDX39A-202ENST00000324340 IGHV3-43A0A0B4J1X8 118 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 C17orf98A8MV24 154 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 MMP23AO75900 390 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 SCAF4O95104 1147 aaKnown RBP10.45□□□□□ -0.74
DDX39A-202ENST00000324340 RBP4P02753 201 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 IGHV3-43DP0DP04 118 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 CCL3L1P16619 93 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 OMGP23515 440 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms