RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 SPIN2BQ9BPZ2 258 aa12.41□□□□□ -0.42
HDDC2-201ENST00000318787 HMX3A6NHT5 357 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 RLN1P04808 185 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 DYRK1AQ13627 763 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 ZBTB34Q8NCN2 500 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.42
HDDC2-201ENST00000318787 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
HDDC2-201ENST00000318787 RGS5O15539 181 aa12.39□□□□□ -0.43
HDDC2-201ENST00000318787 ZNF182P17025 639 aaPredicted RBP12.39□□□□□ -0.43
HDDC2-201ENST00000318787 RPL27AP46776 148 aaKnown RBP12.39□□□□□ -0.43
HDDC2-201ENST00000318787 CLVS1Q8IUQ0 354 aaPredicted RBP12.39□□□□□ -0.43
HDDC2-201ENST00000318787 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
HDDC2-201ENST00000318787 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
HDDC2-201ENST00000318787 OR6F1Q8NGZ6 308 aa12.39□□□□□ -0.43
HDDC2-201ENST00000318787 BORCS5Q969J3 196 aa12.39□□□□□ -0.43
HDDC2-201ENST00000318787 RANGRFQ9HD47 186 aaPredicted RBP12.39□□□□□ -0.43
HDDC2-201ENST00000318787 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
HDDC2-201ENST00000318787 MYOD1P15172 320 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 GNRHRP30968 328 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 RHOGP84095 191 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 CD69Q07108 199 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 MSMO1Q15800 293 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 OR4A47Q6IF82 309 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 PUSL1Q8N0Z8 303 aaKnown RBP12.38□□□□□ -0.43
HDDC2-201ENST00000318787 TMEM167AQ8TBQ9 72 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 CMTM3Q96MX0 182 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 OR4C12Q96R67 309 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 FXYD6Q9H0Q3 95 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 ANAPC10Q9UM13 185 aa12.38□□□□□ -0.43
HDDC2-201ENST00000318787 S1PR2O95136 353 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 RCVRNP35243 200 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
HDDC2-201ENST00000318787 PHLDA2Q53GA4 152 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 C19orf35Q6ZS72 473 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 HAPLN4Q86UW8 402 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 ZNF429Q86V71 674 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 LYSMD2Q8IV50 215 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 CMTM1Q8IZ96 169 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 SCPEP1Q9HB40 452 aa12.37□□□□□ -0.43
HDDC2-201ENST00000318787 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
HDDC2-201ENST00000318787 M0QYG6 137 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 OR2J3O76001 311 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 HPRT1P00492 218 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 REG1AP05451 166 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 NQO2P16083 231 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 NAT1P18440 290 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 ZP3P21754 424 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 INSL3P51460 131 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 ERVK-16P61578 105 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
HDDC2-201ENST00000318787 SPCS2Q15005 226 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 DHRS11Q6UWP2 260 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 ELOVL1Q9BW60 279 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 AKIP1Q9NQ31 210 aa12.36□□□□□ -0.43
HDDC2-201ENST00000318787 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
HDDC2-201ENST00000318787 E7EUB6 86 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 GPR31O00270 319 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 NOL3O60936 208 aaKnown RBP12.35□□□□□ -0.43
HDDC2-201ENST00000318787 RBMXL2O75526 392 aaKnown RBP12.35□□□□□ -0.43
HDDC2-201ENST00000318787 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
HDDC2-201ENST00000318787 HLA-GP17693 338 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 MAS1LP35410 378 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 TAS2R31P59538 309 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 RPEL1Q2QD12 228 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 ACSM6Q6P461 480 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 SLC25A42Q86VD7 318 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 CD300LFQ8TDQ1 290 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 TMEM140Q9NV12 185 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 ADAM30Q9UKF2 790 aa12.35□□□□□ -0.43
HDDC2-201ENST00000318787 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 TEX22C9J3V5 150 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.439e-6■■□□□ 11.7
HDDC2-201ENST00000318787 IGHV3-23P01764 117 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 IFNA6P05013 189 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 IL6RP08887 468 aaPredicted RBP12.34□□□□□ -0.43
HDDC2-201ENST00000318787 DEFA4P12838 97 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 AREGP15514 252 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 S100GP29377 79 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 ZNF45Q02386 682 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
HDDC2-201ENST00000318787 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 BET1LQ9NYM9 111 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 KLK11Q9UBX7 282 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 S4R3C0 116 aa12.34□□□□□ -0.43
HDDC2-201ENST00000318787 PGAM2P15259 253 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms