RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 OR5B3Q8NH48 314 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 SAT2Q96F10 170 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MOB4Q9Y3A3 225 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 TBL2Q9Y4P3 447 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF503-AS2A6NEH8 195 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 PAX5Q02548 391 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 DEFB113Q30KQ7 82 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 OR13A1Q8NGR1 328 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 SFT2D1Q8WV19 159 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM56-RWDD3S4R434 201 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MSMBP08118 114 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 GLIPR1P48060 266 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 PJVKQ0ZLH3 352 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 RAB32Q13637 225 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM187Q14656 261 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 SP6Q3SY56 376 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 PRR30Q53SZ7 412 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 DEFB121Q5J5C9 76 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 U3KQ87 197 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 A0A1W2PPE3 182 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM178BH3BS89 294 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MBPP02686 304 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 UBE2KP61086 200 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 ANGPTL6Q8NI99 470 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 CEP350Q5VT06 3117 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 ZGRF1Q86YA3 2104 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 DBX1A6NMT0 343 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 FOXI3A8MTJ6 420 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MT-ND4LP03901 98 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 KHDC3LQ587J8 217 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 FAM71F2Q6NXP2 309 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 DYRK2Q92630 601 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 MAGT1Q9H0U3 335 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 TNFSF18Q9UNG2 199 aa7.14□□□□□ -1.27
PDLIM5-201ENST00000317968 HEATR1Q9H583 2144 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 NCOA6Q14686 2063 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 I3L521 148 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNHIT1O43257 154 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 CXCL3P19876 107 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 PSG9Q00887 426 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM177Q53S58 311 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 TEX36Q5VZQ5 186 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF680Q8NEM1 530 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 OR4P4Q8NGL7 312 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 PLPPR1Q8TBJ4 325 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 CACNA1BQ00975 2339 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 IGHV3-72A0A0B4J1Y9 119 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 PSMB11A5LHX3 300 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 HYPMO75409 117 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 CLLU1Q5K131 121 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 DGAT2L7PQ6IED9 249 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF880Q6PDB4 577 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM182Q6ZP80 229 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 RPRMLQ8N4K4 120 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 OSR1Q8TAX0 266 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 MYO7BQ6PIF6 2116 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 FFAR4Q5NUL3 377 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ARPC1AQ92747 370 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 KAAG1Q9UBP8 84 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 SPCS3P61009 180 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 BTNL8Q6UX41 500 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 NIPSNAP3BQ9BS92 247 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 HRH4Q9H3N8 390 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 FSTL3O95633 263 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ZFP82Q8N141 532 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 OR4X1Q8NH49 305 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM158Q8WZ71 300 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 URGCP-MRPS24S4R325 110 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 PCNX3Q9H6A9 2034 aa7.13□□□□□ -1.27
PDLIM5-201ENST00000317968 INTS1Q8N201 2190 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 IGKV3-7A0A075B6H7 116 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 TFPI2P48307 235 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 SRSF4Q08170 494 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 C9orf62Q8N4C0 152 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF738Q8NE65 137 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 MS4A10Q96PG2 267 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 WSB1Q9Y6I7 421 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 NBASA2RRP1 2371 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 DAZAP2Q15038 168 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM78Q5T7P6 136 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 DRAM1Q8N682 238 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 AQP10Q96PS8 301 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 RTBDNQ9BSG5 229 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 TMEM133Q9H2Q1 129 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 LYRM2Q9NU23 88 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 G0S2P27469 103 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 MEOX2P50222 304 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 SULT1A1P50225 295 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 HEPN1Q6WQI6 88 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 RPUSD4Q96CM3 377 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms