RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 MT-CO2P00403 227 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 IL3RAP26951 378 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 GNB2P62879 340 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 ZNF146Q15072 292 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 TCF23Q7RTU1 214 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 OR10G8Q8NGN5 311 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 LEAP2Q969E1 77 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 BTF3L4Q96K17 158 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 ATG101Q9BSB4 218 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 CXXC4Q9H2H0 198 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 IGHV3OR15-7A0A075B7D8 119 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 A0A1B0GUS0 222 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 LINC00473A8K010 186 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 NPIPB11E5RHQ5 1161 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 SLC31A2O15432 143 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 GCGP01275 180 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 SRP14P37108 136 aaKnown RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 ERVFC1-1P60608 527 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 RPL19P84098 196 aaKnown RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 FAM103A1Q9BTL3 118 aaKnown RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 MBNL3Q9NUK0 354 aaKnown RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 RALYQ9UKM9 306 aaKnown RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 TNCP24821 2201 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 TCAPO15273 167 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 WISP2O76076 250 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 WT1P19544 449 aaPredicted RBP8.79□□□□□ -1
COL3A1-202ENST00000317840 CD33P20138 364 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 PRSS8Q16651 343 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 FAM214BQ7L5A3 538 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 METRNQ9UJH8 293 aa8.79□□□□□ -1
COL3A1-202ENST00000317840 OR7C2O60412 319 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 OR5R1Q8NH85 324 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 CMTM2Q8TAZ6 248 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 TMEM210A6NLX4 147 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 FCN1O00602 326 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 AQP7O14520 342 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 MGST1P10620 155 aaKnown RBP8.78□□□□□ -1
COL3A1-202ENST00000317840 IGHV1-2P23083 117 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 CCKARP32238 428 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 GABRA6Q16445 453 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 OR4P4Q8NGL7 312 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
COL3A1-202ENST00000317840 IMMP2LQ96T52 175 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 LRFN3Q9BTN0 628 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 WIPI2Q9Y4P8 454 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 NCKAP5O14513 1909 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 VENTXO95231 258 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 CBLN1P23435 193 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 PRDX2P32119 198 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 SLC35B1P78383 322 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 SLC35E4Q6ICL7 350 aa8.78□□□□□ -1
COL3A1-202ENST00000317840 GMPPAQ96IJ6 420 aaPredicted RBP8.78□□□□□ -1
COL3A1-202ENST00000317840 OR9G9P0C7N8 305 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 GNB1P62873 340 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 LINC01551Q86U37 167 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 TBX15Q96SF7 602 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 AGMATQ9BSE5 352 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 TNRC18O15417 2968 aaPredicted RBP8.77□□□□□ -1.01
COL3A1-202ENST00000317840 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 SLC17A3O00476 420 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 CRISP2P16562 243 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 ACSF3Q4G176 576 aaPredicted RBP8.77□□□□□ -1.01
COL3A1-202ENST00000317840 LYG1Q8N1E2 194 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 COQ2Q96H96 371 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 IFNL4K9M1U5 179 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 RRHO14718 337 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 OR4A8P0C604 315 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 IER3P46695 156 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 GNG10P50151 68 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 TCL1AP56279 114 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 FOXF2Q12947 444 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 INO80CQ6PI98 192 aaPredicted RBP8.77□□□□□ -1.01
COL3A1-202ENST00000317840 ZNRF1Q8ND25 227 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 SCNM1Q9BWG6 230 aa8.77□□□□□ -1.01
COL3A1-202ENST00000317840 FAM208BQ5VWN6 2430 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 HPRT1P00492 218 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 CD82P27701 267 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 CASP6P55212 293 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 TAS2R60P59551 318 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 ERVK11-1P61568 191 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 RPL31P62899 125 aaKnown RBP8.76□□□□□ -1.01
COL3A1-202ENST00000317840 NDUFAF3Q9BU61 184 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 MS4A5Q9H3V2 200 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 PAM16Q9Y3D7 125 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 CXorf1O96002 111 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 ADH4P08319 380 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 KRTDAPP60985 99 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 SPCS3P61009 180 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 C9orf106Q8NAJ2 232 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 WDR83OSQ9Y284 106 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 NBEAQ8NFP9 2946 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 IQCF6A8MYZ5 107 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 MLNRO43193 412 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms