RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SDSLQ96GA7 329 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 ASH1LQ9NR48 2969 aaKnown RBP10.88□□□□□ -0.67
CPNE1-201ENST00000317677 ELOVL5Q9NYP7 299 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 PTPN13Q12923 2485 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 C16orf97H3BN30 126 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 CD55P08174 381 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 CIB3Q96Q77 187 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-201ENST00000317677 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 ATP23Q9Y6H3 246 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 PLCE1Q9P212 2302 aa10.88□□□□□ -0.67
CPNE1-201ENST00000317677 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 DPRXA6NFQ7 191 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 F6UZH7 168 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 H7BYZ3 331 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 PSPNO60542 156 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 ZNF728P0DKX0 622 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 EGR1P18146 543 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 BAXQ07812 192 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 BATFQ16520 125 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 ACP7Q6ZNF0 438 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 GAPTQ8N292 157 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 OR2Z1Q8NG97 314 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 OR11L1Q8NGX0 322 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 DOPEY2Q9Y3R5 2298 aa10.87□□□□□ -0.67
CPNE1-201ENST00000317677 IGKV1D-13A0A0B4J2D9 117 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
CPNE1-201ENST00000317677 HAND1O96004 215 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 PPYP01298 95 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 IGKV1-13P0DP09 117 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 MMP9P14780 707 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 TAS2R30P59541 319 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 LGI3Q8N145 548 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 STPG4Q8N801 248 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 ZNF738Q8NE65 137 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 OR1L6Q8NGR2 347 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 GNG13Q9P2W3 67 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 RFNGQ9Y644 331 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 TUSC2O75896 110 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 CDS2O95674 445 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 OR5G3P0C626 314 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 UCP3P55916 312 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 PIGPP57054 158 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 RPL15P61313 204 aaKnown RBP10.86□□□□□ -0.67
CPNE1-201ENST00000317677 RBPJQ06330 500 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 BSXQ3C1V8 233 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 SPIN3Q5JUX0 258 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 LYZL2Q7Z4W2 148 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 WFDC8Q8IUA0 241 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 OR52M1Q8NGK5 317 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 VKORC1Q9BQB6 163 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 SLC2A9Q9NRM0 540 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 RNF115Q9Y4L5 304 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 WIPI2Q9Y4P8 454 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 COX11Q9Y6N1 276 aa10.86□□□□□ -0.67
CPNE1-201ENST00000317677 HECTD1Q9ULT8 2610 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 TRGV8A0A0C4DH27 118 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 IGSF23A1L1A6 192 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 PHLDA2Q53GA4 152 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 TMEM252Q8N6L7 170 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 LRRC29Q8WV35 223 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 RND1Q92730 232 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
CPNE1-201ENST00000317677 POLEQ07864 2286 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 KIR2DS1A0A191URI9 304 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 FAM24AA6NFZ4 105 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 SH2D1BO14796 132 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-201ENST00000317677 KIR2DS4P43632 304 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 TPPP2P59282 170 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 KIR2DS1Q14954 304 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 MMDQ15546 238 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 UBALD1Q8TB05 177 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 OR2V2Q96R30 315 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-201ENST00000317677 TAAR3PQ9P1P4 343 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 UQCR10Q9UDW1 63 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 PXMP4Q9Y6I8 212 aa10.85□□□□□ -0.67
CPNE1-201ENST00000317677 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 TRAV30A0A087WSZ9 112 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 SPRY3O43610 288 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 KBTBD11O94819 623 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 IFNA1P01562 189 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 GNRHRP30968 328 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 CTRLP40313 264 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 MDH2P40926 338 aaKnown RBP10.84□□□□□ -0.67
CPNE1-201ENST00000317677 CA7P43166 264 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 SP6Q3SY56 376 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 Q6ZWC4 215 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 CD177Q8N6Q3 437 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms