RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
TPM1-203ENST00000317516 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
TPM1-203ENST00000317516 SLC2A9Q9NRM0 540 aa13.56□□□□□ -0.24
TPM1-203ENST00000317516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.55□□□□□ -0.24
TPM1-203ENST00000317516 HMX3A6NHT5 357 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 NPIPB5A8MRT5 1133 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.24
TPM1-203ENST00000317516 TNFSF12O43508 249 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 RBMXL2O75526 392 aaKnown RBP13.55□□□□□ -0.24
TPM1-203ENST00000317516 PTHLHP12272 177 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 BRWD1-AS2P59051 145 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
TPM1-203ENST00000317516 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 IL34Q6ZMJ4 242 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 TSPAN14Q8NG11 270 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
TPM1-203ENST00000317516 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
TPM1-203ENST00000317516 C3orf84H3BNL1 204 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 OR2J3O76001 311 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 TNFAIP8O95379 198 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 FCER2P06734 321 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 CSN3P07498 182 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 IGHV4-30-4P0DP06 118 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
TPM1-203ENST00000317516 FXYD4P59646 89 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 ZNF45Q02386 682 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 UBE2NLQ5JXB2 153 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 SSX9Q7RTT3 188 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 Q8N1Y9 231 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 Q8N402 240 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 RCHY1Q96PM5 261 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 HRASLSQ9HDD0 168 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 FBXL7Q9UJT9 491 aa13.54□□□□□ -0.24
TPM1-203ENST00000317516 A8MZ25 164 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 TEX22C9J3V5 150 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 BMPR1BO00238 502 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 HPRT1P00492 218 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 IL6RP08887 468 aaPredicted RBP13.53□□□□□ -0.24
TPM1-203ENST00000317516 ZNF735P0CB33 412 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 HIST1H1BP16401 226 aaKnown RBP13.53□□□□□ -0.24
TPM1-203ENST00000317516 HLA-GP17693 338 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 TAS2R31P59538 309 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 HERV-K104P61576 105 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 GTSCR1Q86UQ5 136 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 OR2K2Q8NGT1 345 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 YIPF6Q96EC8 236 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 TNCP24821 2201 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 DNAH9Q9NYC9 4486 aa13.53□□□□□ -0.24
TPM1-203ENST00000317516 SULT1C2O00338 296 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
TPM1-203ENST00000317516 CRYGCP07315 174 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 DEFA4P12838 97 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 NQO2P16083 231 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 PSMB6P28072 239 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 LSM3P62310 102 aaKnown RBP13.52□□□□□ -0.25
TPM1-203ENST00000317516 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 EHFQ9NZC4 300 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 ADAM30Q9UKF2 790 aa13.52□□□□□ -0.25
TPM1-203ENST00000317516 MEIS3P1A6NDR6 274 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 AADACL3Q5VUY0 350 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 OR4A47Q6IF82 309 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 ZNF818PQ6ZRF7 136 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 TMEM17Q86X19 198 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
TPM1-203ENST00000317516 SMIM31A0A1B0GVY4 71 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 E7EUB6 86 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 PRSS3P35030 304 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 TGFBR1P36897 503 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 TAS2R46P59540 309 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 TAS2R20P59543 309 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 POU2AF1Q16633 256 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 DMBX1Q8NFW5 382 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 OR5H2Q8NGV7 314 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 OR51H1Q8NH63 302 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 COMMD5Q9GZQ3 224 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
TPM1-203ENST00000317516 NBEAL2Q6ZNJ1 2754 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 CYB5BO43169 146 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 FGF2P09038 288 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 AREGP15514 252 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 CTRB1P17538 263 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 GNRHRP30968 328 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 RFX2P48378 723 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 MECP2P51608 486 aaKnown RBP13.49□□□□□ -0.25
TPM1-203ENST00000317516 ERVK-16P61578 105 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 CTRB2Q6GPI1 263 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 CMTM1Q8IZ96 169 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 SLC25A46Q96AG3 418 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 CXorf58Q96LI9 332 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms