RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ZNF320A2RRD8 509 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 MPDU1O75352 247 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 CEACAM4O75871 244 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 EGR1P18146 543 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 ZNF324BQ6AW86 544 aaPredicted RBP11.42□□□□□ -0.58
DDX54-202ENST00000314045 DNM1P46Q6ZS02 220 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 OR8I2Q8N0Y5 310 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 PXMP4Q9Y6I8 212 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 PRB3Q04118 309 aaPredicted RBP11.42□□□□□ -0.58
DDX54-202ENST00000314045 PCSK4Q6UW60 755 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 TMEM56-RWDD3S4R434 201 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 DENND4AQ7Z401 1863 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 TMEM8BA6NDV4 472 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 PAGE4O60829 102 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 ARL16Q0P5N6 197 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 C5orf24Q7Z6I8 188 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 CD177Q8N6Q3 437 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 NEUROG1Q92886 237 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 VAX2Q9UIW0 290 aa11.42□□□□□ -0.58
DDX54-202ENST00000314045 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 LY6G6FQ5SQ64 297 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 C10orf113Q5VZT2 155 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 DPF1Q92782 380 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 MRPL20Q9BYC9 149 aaKnown RBP11.41□□□□□ -0.58
DDX54-202ENST00000314045 ARL3P36405 182 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 CORTO00230 105 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 RND2P52198 227 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 NDUFA6P56556 154 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 PDPNQ86YL7 162 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
DDX54-202ENST00000314045 Q6P435 159 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 GRAMD2BQ96HH9 432 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
DDX54-202ENST00000314045 PTPN13Q12923 2485 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 CFPP27918 469 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 PPOXP50336 477 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 BAGE3Q86Y29 109 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 BAGE2Q86Y30 109 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 CHRDL1Q9BU40 450 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 GOSR1O95249 250 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 REG1AP05451 166 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 SELENOTP62341 195 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 MIC13Q5XKP0 118 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 PITPNC1Q9UKF7 332 aa11.4□□□□□ -0.58
DDX54-202ENST00000314045 SAA2-SAA4A0A096LPE2 208 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 E7EQL1 145 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 SAA2P0DJI9 122 aaPredicted RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 SRSF7Q16629 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX54-202ENST00000314045 TMEM131Q92545 1883 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 SPTBN4Q9H254 2564 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 LINC00869P0C866 280 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 BMI1P35226 326 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 GNG4P50150 75 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 MYPOPQ86VE0 399 aaPredicted RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 FBXL15Q9H469 300 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 RPUSD1Q9UJJ7 312 aaKnown RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 TRAV14DV4A0A0A6YYC5 116 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 CLDN34H7C241 214 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 HYPMO75409 117 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 ZNF705DP0CH99 300 aaPredicted RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 ZNF705BP0CI00 300 aaPredicted RBP11.39□□□□□ -0.59
DDX54-202ENST00000314045 LY6EQ16553 131 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 FAM216AQ8WUB2 273 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 TOLLIPQ9H0E2 274 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 PCNX3Q9H6A9 2034 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 FXYD3Q14802 87 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 STPG2Q8N412 459 aa11.39□□□□□ -0.59
DDX54-202ENST00000314045 PPP1R2P9O14990 202 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 CXorf1O96002 111 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 F12P00748 615 aaPredicted RBP11.38□□□□□ -0.59
DDX54-202ENST00000314045 C4orf17Q53FE4 359 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 CTDSP1Q9GZU7 261 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
DDX54-202ENST00000314045 COMPP49747 757 aaPredicted RBP11.38□□□□□ -0.59
DDX54-202ENST00000314045 IGKV1D-17A0A075B6S4 117 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 RNF222A6NCQ9 220 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 PF4V1P10720 104 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 SUPT4H1P63272 117 aaKnown RBP11.38□□□□□ -0.59
DDX54-202ENST00000314045 OR5I1Q13606 314 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 DPPA3Q6W0C5 159 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms