RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RSRP1Q9BUV0 290 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 GPR31O00270 319 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 KBTBD11O94819 623 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 OR2A4O95047 310 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 PF4P02776 101 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 OR9G9P0C7N8 305 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 RRASP10301 218 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 PGAM2P15259 253 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-201ENST00000311943 ZNF45Q02386 682 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 VMA21Q3ZAQ7 101 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 CCDC190Q86UF4 302 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM229BQ8NBD8 167 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 OR51S1Q8NGJ8 323 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 DGCR14Q96DF8 476 aaKnown RBP9.33□□□□□ -0.92
SCFD1-201ENST00000311943 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
SCFD1-201ENST00000311943 OR2A7Q96R45 310 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 P2RX4Q99571 388 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 SLC2A9Q9NRM0 540 aa9.33□□□□□ -0.92
SCFD1-201ENST00000311943 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-201ENST00000311943 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 CCL24O00175 119 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 ELANEP08246 267 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 CDX1P47902 265 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TPPP2P59282 170 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 BAK1Q16611 211 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 AKIRIN2Q53H80 203 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 PYDC2Q56P42 97 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 OR11H1Q8NG94 326 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TRIM63Q969Q1 353 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 PHB2Q99623 299 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 SDHCQ99643 169 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-201ENST00000311943 THAP7Q9BT49 309 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-201ENST00000311943 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM140Q9NV12 185 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 LINC00854A0A1B0GVQ3 168 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 ANKRD20A5PA0PJZ0 165 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 I3L521 148 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 SLC22A5O76082 557 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TRGV3P03979 118 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 IFNA6P05013 189 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 F2RP25116 425 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 SLURP1P55000 103 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 PIGPP57054 158 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TAS2R19P59542 299 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 OR2B8PP59922 312 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 CBX3Q13185 183 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM65Q6PI78 240 aa9.32□□□□□ -0.92
SCFD1-201ENST00000311943 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
SCFD1-201ENST00000311943 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-201ENST00000311943 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 A0A087WW49 117 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 ANKRD34BA5PLL1 514 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 CTDSPLO15194 276 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 CD33P20138 364 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 SPINK9Q5DT21 86 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 ZBTB34Q8NCN2 500 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 DMBX1Q8NFW5 382 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 OR6Q1Q8NGQ2 317 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM167AQ8TBQ9 72 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 COA4Q9NYJ1 87 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 DMRT1Q9Y5R6 373 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 A0A0G2JRQ6 117 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 WIPF1O43516 503 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 HPRT1P00492 218 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 CATR1Q13166 79 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 C11orf87Q6NUJ2 197 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 TERB2Q8NHR7 220 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 GON7Q9BXV9 100 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 ZFP57Q9NU63 452 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 MCUBQ9NWR8 336 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
SCFD1-201ENST00000311943 MARCH11A6NNE9 402 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 UPK2O00526 184 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 MPPED1O15442 326 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 GSTZ1O43708 216 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-201ENST00000311943 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-201ENST00000311943 BEAN1Q3B7T3 259 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 Q8N402 240 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 POC5Q8NA72 575 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 WFDC9Q8NEX5 89 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 LHFPL5Q8TAF8 219 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 C4orf3Q8WVX3 66 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 SRRQ9GZT4 340 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 VSIG4Q9Y279 399 aa9.3□□□□□ -0.92
SCFD1-201ENST00000311943 ZNF701M0R085 212 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 OR2J3O76001 311 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 HLA-AP01891 365 aaKnown RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 EDN2P20800 178 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 UCP3P55916 312 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms