RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RPH3ALQ9UNE2 315 aa15.11■□□□□ 0.01
SPSB4-201ENST00000310546 FAM90A26D6RGX4 464 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 VASH2Q86V25 355 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 BCL2L2Q92843 193 aaPredicted RBP15.1■□□□□ 0.01
SPSB4-201ENST00000310546 ST6GALNAC6Q969X2 333 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 FGF23Q9GZV9 251 aaPredicted RBP15.1■□□□□ 0.01
SPSB4-201ENST00000310546 TRAV9-1A0A075B6T8 112 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 ODAMA1E959 279 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 OR5B21A6NL26 309 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 GABRA2P47869 451 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 OR4F17Q8NGA8 305 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF391Q9UJN7 358 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 DMXL2Q8TDJ6 3036 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 TMEM238C9JI98 176 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 COL8A2P25067 703 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 OR10J3Q5JRS4 329 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 TMEM38BQ9NVV0 291 aa15.1■□□□□ 0.01
SPSB4-201ENST00000310546 DSPP15924 2871 aaKnown RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 LRP5LA4QPB2 252 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 ZNF891A8MT65 544 aaPredicted RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 NTF4P34130 210 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 DUSP3P51452 185 aaPredicted RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 MPV17L2Q567V2 206 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 DRAM1Q8N682 238 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 Q8NFD4 153 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 TSKUQ8WUA8 353 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 CDC42EP3Q9UKI2 254 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 RP1L1Q8IWN7 2480 aaPredicted RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 IGLV3-32A0A0A0MS00 114 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 VAMP5O95183 116 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 IGLL1P15814 213 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 MRPL54Q6P161 138 aaKnown RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 OR5B3Q8NH48 314 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 OR2H1Q9GZK4 316 aa15.09■□□□□ 0.01
SPSB4-201ENST00000310546 C19orf25Q9UFG5 118 aaPredicted RBP15.09■□□□□ 0.01
SPSB4-201ENST00000310546 LRRC30A6NM36 301 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 CCL2P13500 99 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 FXYD3Q14802 87 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 TRIP6Q15654 476 aaKnown RBP15.08■□□□□ 0
SPSB4-201ENST00000310546 YTHDF2Q9Y5A9 579 aaKnown RBP15.08■□□□□ 0
SPSB4-201ENST00000310546 TRAV24A0A0B4J272 114 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 OR2T8A6NH00 312 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 RRHO14718 337 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 PRR27Q6MZM9 219 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 NCOR1P1Q9H4R4 102 aa15.08■□□□□ 0
SPSB4-201ENST00000310546 TRBV9A0A0B4J1U6 114 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 CLDN14O95500 239 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 PMCHL1Q16048 86 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 MUC15Q8N387 334 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 PNKDQ8N490 385 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 RNF138Q8WVD3 245 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.07■□□□□ 0
SPSB4-201ENST00000310546 WASHC3Q9Y3C0 194 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 SPENQ96T58 3664 aaKnown RBP15.07■□□□□ 0
SPSB4-201ENST00000310546 TRAV9-2A0A087WT02 112 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 CER1O95813 267 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 DCAF12Q5T6F0 453 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 C19orf35Q6ZS72 473 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 OR2D2Q9H210 308 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 V9GYV3 84 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 CEP295Q9C0D2 2601 aa15.07■□□□□ 0
SPSB4-201ENST00000310546 IGLV3-12A0A075B6K2 115 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 BMPR1BO00238 502 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 CD1BP29016 333 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 AMMECR1LQ6DCA0 310 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 TMEM136Q6ZRR5 245 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 ZNF808Q8N4W9 903 aaPredicted RBP15.06■□□□□ 0
SPSB4-201ENST00000310546 Q8N7P7 452 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 RNASE7Q9H1E1 156 aaKnown RBP15.06■□□□□ 0
SPSB4-201ENST00000310546 SAA2-SAA4A0A096LPE2 208 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 ZFAND5O76080 213 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 IGHV3-9P01782 118 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 CEACAM16Q2WEN9 425 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 DOLPP1Q86YN1 238 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 SPACA9Q96E40 222 aaPredicted RBP15.06■□□□□ 0
SPSB4-201ENST00000310546 EAF1Q96JC9 268 aaPredicted RBP15.06■□□□□ 0
SPSB4-201ENST00000310546 FOXB1Q99853 325 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 TRAPPC2LQ9UL33 140 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 MT-ND6P03923 174 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 RIPPLY3P57055 190 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 WDR73Q6P4I2 378 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 SLC23A3Q6PIS1 610 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 ZNF439Q8NDP4 499 aa15.06■□□□□ 0
SPSB4-201ENST00000310546 SEPSECSQ9HD40 501 aaKnown RBP15.06■□□□□ 0
SPSB4-201ENST00000310546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.05■□□□□ 0
SPSB4-201ENST00000310546 PDLIM3Q53GG5 364 aaPredicted RBP15.05■□□□□ 0
SPSB4-201ENST00000310546 RAB1CQ92928 201 aa15.05■□□□□ 0
SPSB4-201ENST00000310546 SRXN1Q9BYN0 137 aa15.05■□□□□ 0
SPSB4-201ENST00000310546 AKAP13Q12802 2813 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 FKBP2P26885 142 aaKnown RBP15.05■□□□□ -0
SPSB4-201ENST00000310546 CX3CL1P78423 397 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 RHOGP84095 191 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 LRRC10Q5BKY1 277 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 CHODLQ9H9P2 273 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 DLL3Q9NYJ7 618 aa15.05■□□□□ -0
SPSB4-201ENST00000310546 A0A0J9YW62 118 aa15.04■□□□□ -0
SPSB4-201ENST00000310546 CXorf1O96002 111 aa15.04■□□□□ -0
SPSB4-201ENST00000310546 FADS6Q8N9I5 356 aa15.04■□□□□ -0
SPSB4-201ENST00000310546 PRR33A8MZF0 331 aa15.04■□□□□ -0
SPSB4-201ENST00000310546 HSBP1O75506 76 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms