RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 HILPDAQ9Y5L2 63 aa13.33□□□□□ -0.27
HCFC1-201ENST00000310441 ZNF688P0C7X2 276 aa13.33□□□□□ -0.27
HCFC1-201ENST00000310441 GATAD1Q8WUU5 269 aa13.33□□□□□ -0.27
HCFC1-201ENST00000310441 PRR13Q9NZ81 148 aa13.33□□□□□ -0.27
HCFC1-201ENST00000310441 TMEM131Q92545 1883 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1B0GUT8 65 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 ACSF3Q4G176 576 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-201ENST00000310441 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 FLRT3Q9NZU0 649 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 PQLC2LA1A4F0 135 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 SLC25A53Q5H9E4 307 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 NKX2-8O15522 239 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 DUSP15Q9H1R2 295 aaPredicted RBP13.33□□□□□ -0.28
HCFC1-201ENST00000310441 RIPPLY2Q5TAB7 128 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 CFAP161Q6P656 301 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 MEX3AA1L020 520 aaKnown RBP13.33□□□□□ -0.28
HCFC1-201ENST00000310441 NPIPB11E5RHQ5 1161 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 MALP21145 153 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 PGFP49763 221 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 MIXL1Q9H2W2 232 aa13.33□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1B0GWB2 263 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 OR2H2O95918 312 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 IDI2-AS1Q9NZ38 188 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 RRHO14718 337 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 GCM2O75603 506 aaPredicted RBP13.32□□□□□ -0.28
HCFC1-201ENST00000310441 FAM214BQ7L5A3 538 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 CIARTQ8N365 385 aaPredicted RBP13.32□□□□□ -0.28
HCFC1-201ENST00000310441 TMEM252Q8N6L7 170 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 PLNP26678 52 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 R4GN57 208 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 SIGLEC5O15389 551 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 DTX2Q86UW9 622 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
HCFC1-201ENST00000310441 FGFRL1Q8N441 504 aa13.32□□□□□ -0.28
HCFC1-201ENST00000310441 MPTX1A8MV57 137 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 TM4SF5O14894 197 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 PLCE1Q9P212 2302 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1W2PRD5 423 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1W2PRF3 423 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 A0A1W2PRM7 423 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 NMBP08949 121 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 DTX1Q86Y01 620 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 CCL27Q9Y4X3 112 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 CLDN16Q9Y5I7 305 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
HCFC1-201ENST00000310441 CGB1A6NKQ9 187 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 PF4P02776 101 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 OR9G1Q8NH87 305 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 ANAPC1Q9H1A4 1944 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 VKORC1L1Q8N0U8 176 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 ORMDL3Q8N138 153 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 NPIPB13A6NJU9 1138 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 NPIPB4C9JG80 1138 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 AGFG2O95081 481 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 IGKV3D-15A0A087WSY6 115 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 IGHV3-21A0A0B4J1V1 117 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 SYNGR3O43761 229 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF205O95201 554 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 IGKV3-15P01624 115 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 MIC13Q5XKP0 118 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 FOXJ2Q9P0K8 574 aa13.31□□□□□ -0.28
HCFC1-201ENST00000310441 FOXH1O75593 365 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 SSBP4Q9BWG4 385 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 CALYQ9NYX4 217 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 FOXD3Q9UJU5 478 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF729A6NN14 1252 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 THY1P04216 161 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 CCL3P10147 92 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 CBLN4Q9NTU7 201 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 PLA2G10O15496 165 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 FHITP49789 147 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF250P15622 560 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 MGST2Q99735 147 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 PTP4A3O75365 173 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-201ENST00000310441 SCGB3A1Q96QR1 104 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 TNCP24821 2201 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 HCP5Q6MZN7 132 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 WNT2BQ93097 391 aa13.3□□□□□ -0.28
HCFC1-201ENST00000310441 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
HCFC1-201ENST00000310441 RND2P52198 227 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 Q6ZS52 159 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 C9orf40Q8IXQ3 194 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 COL18A1P39060 1754 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 A0A087WWC5 75 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 IGKV3D-11A0A0A0MRZ8 115 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms