RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PDZD11Q5EBL8 140 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 DHRS11Q6UWP2 260 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 NUDT11Q96G61 164 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 VGLL1Q99990 258 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS50Q9UI38 385 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 RAXQ9Y2V3 346 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 IGKV3D-15A0A087WSY6 115 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TTRP02766 147 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SNRPNP63162 240 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 DLK1P80370 383 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SRSF9Q13242 221 aaKnown RBP eCLIP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 FGFRL1Q8N441 504 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 POC1AQ8NBT0 407 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SGK494Q96LW2 274 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TINAGL1Q9GZM7 467 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM74BQ9NUR3 256 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 A0A1B0GTI1 187 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 KBTBD11-OT1A0A1B0GTJ5 212 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 A6NDN8 102 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TIMM23O14925 209 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 KLF4O43474 513 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 GPX1P07203 203 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS2P07478 247 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 FCGR3AP08637 254 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PI3P19957 117 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SNRPEP62304 92 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MYPOPQ86VE0 399 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 OR5H6Q8NGV6 325 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 CCL13Q99616 98 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MAP1LC3AQ9H492 121 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 BET1LQ9NYM9 111 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 OR2W5A6NFC9 320 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 H3BRM9 83 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 VDAC2P45880 294 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 OR10AG1Q8NH19 301 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 DUX5Q96PT3 197 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PLSCR4Q9NRQ2 329 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 HSPB7Q9UBY9 170 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TRAV9-1A0A075B6T8 112 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 IGKV3D-11A0A0A0MRZ8 115 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 K7ENP7 123 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SLC25A20O43772 301 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 WNT2P09544 360 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 RPS27P42677 84 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PMP22Q01453 160 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MBNL2Q5VZF2 373 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SPSB4Q96A44 273 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 WBP1Q96G27 269 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SMIM8Q96KF7 97 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PSMG3Q9BT73 122 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 EP400Q96L91 3159 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TRBV7-1A0A0A6YYK4 115 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 A0A1W2PR80 420 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 CBY3A6NI87 242 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 GDF9O60383 454 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 CEACAM4O75871 244 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 NXPH3O95157 252 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 THY1P04216 161 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 VSIG8P0DPA2 414 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 C3AR1Q16581 482 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PVRIGQ6DKI7 326 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TM2D1Q9BX74 207 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 DOK5Q9P104 306 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SEMA5BQ9P283 1151 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TRGV3P03979 118 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 NBL1P41271 181 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TNFRSF9Q07011 255 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 RAB32Q13637 225 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 SP6Q3SY56 376 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM155Q4W5P6 130 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 VWA1Q6PCB0 445 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 Q6ZS92 163 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 STHQ8IWL8 128 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM123Q8N131 208 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 C11orf42Q8N5U0 333 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 BEND2Q8NDZ0 799 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 FAM131CQ96AQ9 280 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 ASCL2Q99929 193 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM140Q9NV12 185 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 PCNX3Q9H6A9 2034 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MBD3L4A6NDZ8 208 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MBD3L3A6NE82 208 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MBD3L5A6NJ08 208 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 GREM1O60565 184 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF253O75346 499 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 CDX1P47902 265 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 IBA57Q5T440 356 aaKnown RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM179BQ7Z7N9 219 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 C17orf82Q86X59 251 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 LINC01356Q8N9X3 169 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 OR13A1Q8NGR1 328 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 MBD3L2Q8NHZ7 208 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 LTBP2Q14767 1821 aa2.71□□□□□ -1.97
CLOCK-201ENST00000309964 PQLC2LA1A4F0 135 aa2.71□□□□□ -1.97
CLOCK-201ENST00000309964 SHISA8B8ZZ34 492 aa2.71□□□□□ -1.97
CLOCK-201ENST00000309964 NBR2O15453 112 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms