RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SRRM4A7MD48 611 aaKnown RBP17.31■□□□□ 0.36
ATG4D-201ENST00000309469 C15orf62A8K5M9 175 aa17.31■□□□□ 0.36
ATG4D-201ENST00000309469 ARG1P05089 322 aa17.31■□□□□ 0.36
ATG4D-201ENST00000309469 NABP2Q9BQ15 211 aa17.31■□□□□ 0.36
ATG4D-201ENST00000309469 RSG1Q9BU20 258 aa17.31■□□□□ 0.36
ATG4D-201ENST00000309469 HIPK2Q9H2X6 1198 aa17.31■□□□□ 0.36
ATG4D-201ENST00000309469 H7C2Y5 167 aa17.3■□□□□ 0.36
ATG4D-201ENST00000309469 RPS16P62249 146 aaKnown RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 RPP30P78346 268 aaKnown RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 DIAPH2-AS1Q14236 149 aa17.3■□□□□ 0.36
ATG4D-201ENST00000309469 OSR1Q8TAX0 266 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 PSMG3Q9BT73 122 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 TMEM147Q9BVK8 224 aa17.3■□□□□ 0.36
ATG4D-201ENST00000309469 NKX6-2Q9C056 277 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 HEYLQ9NQ87 328 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-201ENST00000309469 UBE2L5PA0A1B0GUS4 154 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 UPK2O00526 184 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 RBP4P02753 201 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 CDKN1AP38936 164 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 HSPE1P61604 102 aaKnown RBP17.29■□□□□ 0.36
ATG4D-201ENST00000309469 LY6G5BQ8NDX9 201 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 TNFRSF14Q92956 283 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 SCAF4O95104 1147 aaKnown RBP17.29■□□□□ 0.36
ATG4D-201ENST00000309469 IL3RAP26951 378 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 GUCA2BQ16661 112 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 DPPA3Q6W0C5 159 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 TAF15Q92804 592 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATG4D-201ENST00000309469 PRNDQ9UKY0 176 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 ABCA4P78363 2273 aa17.29■□□□□ 0.36
ATG4D-201ENST00000309469 IGHV2-26A0A0B4J1V2 119 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 A6NNC1 897 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 IFNA10P01566 189 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 SFTA3P0C7M3 94 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 TMEM177Q53S58 311 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 TGIF2LXQ8IUE1 241 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 LFNGQ8NES3 379 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 LHX4Q969G2 390 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 PATZ1Q9HBE1 687 aaKnown RBP17.28■□□□□ 0.36
ATG4D-201ENST00000309469 OR51B2Q9Y5P1 312 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 DOCK11Q5JSL3 2073 aa17.28■□□□□ 0.36
ATG4D-201ENST00000309469 HRNRQ86YZ3 2850 aaPredicted RBP17.27■□□□□ 0.36
ATG4D-201ENST00000309469 HOXA1P49639 335 aaPredicted RBP17.27■□□□□ 0.36
ATG4D-201ENST00000309469 PRRX1P54821 245 aa17.27■□□□□ 0.36
ATG4D-201ENST00000309469 FLYWCH2Q96CP2 140 aaKnown RBP17.27■□□□□ 0.36
ATG4D-201ENST00000309469 PCGF1Q9BSM1 259 aa17.27■□□□□ 0.36
ATG4D-201ENST00000309469 BET1LQ9NYM9 111 aa17.27■□□□□ 0.36
ATG4D-201ENST00000309469 LRBAP50851 2863 aa17.27■□□□□ 0.36
ATG4D-201ENST00000309469 F12P00748 615 aaPredicted RBP17.27■□□□□ 0.35
ATG4D-201ENST00000309469 LIPFP07098 398 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 H2AFB1P0C5Y9 115 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 SERF2P84101 59 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 GUK1Q16774 197 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 VWC2Q2TAL6 325 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 PDPNQ86YL7 162 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 PUSL1Q8N0Z8 303 aaKnown RBP17.27■□□□□ 0.35
ATG4D-201ENST00000309469 HARBI1Q96MB7 349 aa17.27■□□□□ 0.35
ATG4D-201ENST00000309469 hCG_1809904A0A1W2PP81 198 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 A0A1W2PPE2 198 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 A0A1W2PR64 198 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 A0A1W2PRV1 198 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 C22orf46C9J442 243 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 FAM157AC9JC47 383 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 C9JQL5 133 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 KBTBD11O94819 623 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 IGLV1-47P01700 117 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 SAA1P0DJI8 122 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-201ENST00000309469 DLX1P56177 255 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 PEA15Q15121 130 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 CLEC7AQ9BXN2 247 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 EIF5A2Q9GZV4 153 aaKnown RBP17.26■□□□□ 0.35
ATG4D-201ENST00000309469 ZNF257Q9Y2Q1 563 aa17.26■□□□□ 0.35
ATG4D-201ENST00000309469 NDUFS7O75251 213 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 MYOD1P15172 320 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 TLE4Q04727 773 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 SMUG1Q53HV7 270 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 SPSB3Q6PJ21 355 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 OR4C13Q8NGP0 309 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 PBDC1Q9BVG4 233 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 SCRT1Q9BWW7 348 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 WASHC3Q9Y3C0 194 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 TIMM9Q9Y5J7 89 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 A0A1B0GV50 99 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 RRHO14718 337 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 HLA-DRB5Q30154 266 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 ETV3LQ6ZN32 361 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 CENPVQ7Z7K6 275 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-201ENST00000309469 ENY2Q9NPA8 101 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 FKBP11Q9NYL4 201 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 ONECUT1Q9UBC0 465 aa17.25■□□□□ 0.35
ATG4D-201ENST00000309469 MC5RP33032 325 aa17.24■□□□□ 0.35
ATG4D-201ENST00000309469 GPR6P46095 362 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-201ENST00000309469 PRB3Q04118 309 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-201ENST00000309469 BEND2Q8NDZ0 799 aa17.24■□□□□ 0.35
ATG4D-201ENST00000309469 SSBP3Q9BWW4 388 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-201ENST00000309469 RPRMQ9NS64 109 aa17.24■□□□□ 0.35
ATG4D-201ENST00000309469 BTBD17A6NE02 478 aa17.23■□□□□ 0.35
ATG4D-201ENST00000309469 SNAPINO95295 136 aa17.23■□□□□ 0.35
ATG4D-201ENST00000309469 FGF7P21781 194 aa17.23■□□□□ 0.35
ATG4D-201ENST00000309469 RAB13P51153 203 aa17.23■□□□□ 0.35
ATG4D-201ENST00000309469 EFNA4P52798 201 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms