RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IGHV1-8P0DP01 117 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 HNF4GQ14541 408 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 OR10X1Q8NGY0 326 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 CIB3Q96Q77 187 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 SLC35B3Q9H1N7 401 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 KIAA1456Q9P272 454 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 ASH1LQ9NR48 2969 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 RBFOX3A6NFN3 312 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 AKIRIN2Q53H80 203 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 ETV3LQ6ZN32 361 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 OR4A16Q8NH70 328 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 NEU4Q8WWR8 484 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 TAF15Q92804 592 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 RHOVQ96L33 236 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 MRPL20Q9BYC9 149 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 J3QR06 171 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 IFNA17P01571 189 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 OR8U8P0C7N1 319 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 OR13C7P0DN81 318 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 HAGHQ16775 308 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 ZNF833PQ6ZTB9 187 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 PARD6GQ9BYG4 376 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 TRBV23-1A0A0A0MS06 115 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 IGFBP2P18065 325 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 RAB1CQ92928 201 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 TIMD4Q96H15 378 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 ADTRPQ96IZ2 230 aa18.3■□□□□ 0.52
PDLIM2-202ENST00000308354 USP9XQ93008 2570 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 RELBQ01201 579 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 WDR25Q64LD2 544 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 ABHD12Q8N2K0 398 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 OR8B3Q8NGG8 313 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 OR8B2Q96RD0 313 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 AIFM2Q9BRQ8 373 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 SLC35D1Q9NTN3 355 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 EPG5Q9HCE0 2579 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 FAM90A9PA6NNJ1 464 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 FSTL3O95633 263 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 RNF224P0DH78 156 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 ELLP55199 621 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 AARDQ4LEZ3 155 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 OR4A47Q6IF82 309 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 OR10P1Q8NGE3 313 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 RAB39BQ96DA2 213 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 HIPK2Q9H2X6 1198 aa18.29■□□□□ 0.52
PDLIM2-202ENST00000308354 PPIAL4CA0A0B4J2A2 164 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 A6NNC1 897 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 PPIAL4GP0DN37 164 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 SERF2P84101 59 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 ZNF726P1Q15940 193 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 SSX7Q7RTT5 188 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 NEIL1Q96FI4 390 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 TMEM147Q9BVK8 224 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 MYO18BQ8IUG5 2567 aa18.28■□□□□ 0.52
PDLIM2-202ENST00000308354 HBE1P02100 147 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 AKR1C3P42330 323 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 OR13D1Q8NGV5 346 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 MIOXQ9UGB7 285 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 ARHGAP32A7KAX9 2087 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 SRRM4A7MD48 611 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 H7C2Y5 167 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 PINX1Q96BK5 328 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 RCC1LQ96I51 464 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 TMEM133Q9H2Q1 129 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 CHODLQ9H9P2 273 aa18.27■□□□□ 0.52
PDLIM2-202ENST00000308354 C15orf62A8K5M9 175 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 MYOD1P15172 320 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 RAB2AP61019 212 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 ATP6V1FQ16864 119 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 RTL8BQ17RB0 113 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 AWAT1Q58HT5 328 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 LCN15Q6UWW0 184 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 OR9G1Q8NH87 305 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 CLDND2Q8NHS1 167 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 C20orf24Q9BUV8 137 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 SMDT1Q9H4I9 107 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 TNCP24821 2201 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 TRAV1-1A0A0B4J248 108 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 C22orf46C9J442 243 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 SPCS3P61009 180 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 ICAM4Q14773 271 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 ZNF462Q96JM2 2506 aa18.26■□□□□ 0.51
PDLIM2-202ENST00000308354 A0A087X0M5 115 aa18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 A0A1B0GX30 115 aa18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 FGF8P55075 233 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 TMEM41BQ5BJD5 291 aa18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 EIF3GO75821 320 aaKnown RBP eCLIP18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 SCAF4O95104 1147 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 FGF7P21781 194 aa18.25■□□□□ 0.51
PDLIM2-202ENST00000308354 UTP20O75691 2785 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 H0YJW9 148 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 M0R036 132 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 HRASP01112 189 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 FBP1P09467 338 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 GNB2P62879 340 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 SOHLH1Q5JUK2 328 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 ZNF506Q5JVG8 444 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 ZNF787Q6DD87 383 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 LINC00311Q8N616 119 aa18.24■□□□□ 0.51
PDLIM2-202ENST00000308354 ZNF596Q8TC21 504 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms