RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DLL1O00548 723 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 PTP4A3O75365 173 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 COX6B1P14854 86 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 TRAV24A0A0B4J272 114 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 PIN1P1O15428 100 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 GZMBP10144 247 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
USP38-201ENST00000307017 MARCH11A6NNE9 402 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 HOXC4P09017 264 aaPredicted RBP10.79□□□□□ -0.68
USP38-201ENST00000307017 C1QTNF9BB2RNN3 333 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 HLA-DRB1P01911 266 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 CXCL10P02778 98 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 C1QL4Q86Z23 238 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 CISD1Q9NZ45 108 aaKnown RBP10.78□□□□□ -0.68
USP38-201ENST00000307017 LHFPL6Q9Y693 200 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 H0Y980 276 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 CELA3AP09093 270 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 CKS1BP61024 79 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 IGHV1-45A0A0A0MS14 117 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 TCF24Q7RTU0 167 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 ASAH2BP0C7U1 165 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 FGF12P61328 243 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 OR51G1Q8NGK1 321 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
USP38-201ENST00000307017 DNAJC4Q9NNZ3 241 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 REC114Q7Z4M0 266 aa10.78□□□□□ -0.68
USP38-201ENST00000307017 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
USP38-201ENST00000307017 ZCCHC24Q8N2G6 241 aaKnown RBP10.78□□□□□ -0.68
USP38-201ENST00000307017 CD1AP06126 327 aa10.77□□□□□ -0.68
USP38-201ENST00000307017 DCAF10Q5QP82 559 aa10.77□□□□□ -0.68
USP38-201ENST00000307017 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.68
USP38-201ENST00000307017 DNAL4O96015 105 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 FTH1P19P0C7X4 201 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 ZNF345Q14585 488 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 OR10AG1Q8NH19 301 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 WDR34Q96EX3 536 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 ALKBH7Q9BT30 221 aaPredicted RBP10.77□□□□□ -0.69
USP38-201ENST00000307017 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP38-201ENST00000307017 HBBP68871 147 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 ASCL5Q7RTU5 278 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 HEXA-AS1Q9H8Q6 139 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 DEPPQ9NTK1 212 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 CTSSP25774 331 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 C5orf24Q7Z6I8 188 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 LURAP1LQ8IV03 231 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 AQP3Q92482 292 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 NABP2Q9BQ15 211 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 SELENOTP62341 195 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.69
USP38-201ENST00000307017 HOXC8P31273 242 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 LEPP41159 167 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 C1orf185Q5T7R7 199 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 MARS2Q96GW9 593 aaKnown RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 TMEM70Q9BUB7 260 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 GCM2O75603 506 aaPredicted RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 MPV17P39210 176 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 ATP5G2Q06055 141 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CD69Q07108 199 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 IDI2-AS1Q9NZ38 188 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 KCNE5Q9UJ90 142 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 LINC00527Q9UJ94 153 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 IGKV1D-43A0A0B4J1Z2 117 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 GLULP15104 373 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CLEC19AQ6UXS0 136 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 ZNF414Q96IQ9 312 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 LOC390937A0A1W2PQ73 354 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 TIAF1O95411 115 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 ZFP36L2P47974 494 aaKnown RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 ASPHD2Q6ICH7 369 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 TMEM45BQ96B21 275 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CXorf51AA0A1B0GTR3 108 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 RALGAPA1Q6GYQ0 2036 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CELA3BP08861 270 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 CD33P20138 364 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 TMEM187Q14656 261 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 FBXL15Q9H469 300 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 ZNF430Q9H8G1 570 aaPredicted RBP10.76□□□□□ -0.69
USP38-201ENST00000307017 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
USP38-201ENST00000307017 ARAP2Q8WZ64 1704 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 PEX7O00628 323 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 C12orf54Q6X4T0 127 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 LY75O60449 1722 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 FGF5P12034 268 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 GCHFRP30047 84 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 PCSK4Q6UW60 755 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 STRCQ7RTU9 1775 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 TRAV2A0A0B4J234 112 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 C1RLQ9NZP8 487 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 CLDN16Q9Y5I7 305 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms