RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 OR2B8PP59922 312 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 LOXL1Q08397 574 aaPredicted RBP14.15□□□□□ -0.14
KRT28-201ENST00000306658 LDLRAD2Q5SZI1 272 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 TEX261Q6UWH6 196 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 CIB3Q96Q77 187 aaPredicted RBP14.15□□□□□ -0.14
KRT28-201ENST00000306658 PRNDQ9UKY0 176 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 U3KQ87 197 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 A0A096LNT2 108 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 TRAV3A0A0B4J244 114 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 TRAV20A0A0B4J274 112 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 FAM24AA6NFZ4 105 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 UPK2O00526 184 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 LY86O95711 162 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 TMEM50AO95807 157 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 SAA1P0DJI8 122 aaPredicted RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 PAX9P55771 341 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 SPCS3P61009 180 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 PUSL1Q8N0Z8 303 aaKnown RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 OR4A5Q8NH83 315 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 RBMXL1Q96E39 390 aaKnown RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 RNF5Q99942 180 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 ZNF471Q9BX82 626 aaPredicted RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 FKBP11Q9NYL4 201 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 PSENENQ9NZ42 101 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 NUP50Q9UKX7 468 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 FOXA2Q9Y261 457 aaPredicted RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 CEBPZOSA8MTT3 80 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 TIMM23O14925 209 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 IAPPP10997 89 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 CD1BP29016 333 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 VMA21Q3ZAQ7 101 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 PDLIM3Q53GG5 364 aaPredicted RBP14.14□□□□□ -0.15
KRT28-201ENST00000306658 TMEM252Q8N6L7 170 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 LINC01356Q8N9X3 169 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 DTD1Q8TEA8 209 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 MALSU1Q96EH3 234 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 TMEM14BQ9NUH8 114 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 AUP1Q9Y679 476 aa14.14□□□□□ -0.15
KRT28-201ENST00000306658 KBTBD11O94819 623 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 IFNA7P01567 189 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 EWSR1Q01844 656 aaKnown RBP eCLIP14.13□□□□□ -0.15
KRT28-201ENST00000306658 HABP2Q14520 560 aaPredicted RBP14.13□□□□□ -0.15
KRT28-201ENST00000306658 SSX2Q16385 188 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 ZNF767PQ75MW2 155 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 CLCC1Q96S66 551 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 TSNAXQ99598 290 aaKnown RBP14.13□□□□□ -0.15
KRT28-201ENST00000306658 REG4Q9BYZ8 158 aa14.13□□□□□ -0.15
KRT28-201ENST00000306658 CENPVL3A0A0U1RRI6 287 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 IGLV2-23P01705 113 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 HSPE1P61604 102 aaKnown RBP14.12□□□□□ -0.15
KRT28-201ENST00000306658 UBA52P62987 128 aaKnown RBP14.12□□□□□ -0.15
KRT28-201ENST00000306658 NHLH2Q02577 135 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 BAXQ07812 192 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 STX12Q86Y82 276 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 ZNF680Q8NEM1 530 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 TMEM167AQ8TBQ9 72 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 C7orf69Q9H7B7 122 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 HIF1ANQ9NWT6 349 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 ZNF257Q9Y2Q1 563 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 OR51B2Q9Y5P1 312 aa14.12□□□□□ -0.15
KRT28-201ENST00000306658 FASNP49327 2511 aaKnown RBP14.11□□□□□ -0.15
KRT28-201ENST00000306658 IGSF23A1L1A6 192 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 RNF223E7ERA6 249 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 NPFFO15130 113 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 SPDEFO95238 335 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 FGF2P09038 288 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 TEX45Q8NA69 505 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 ZDHHC16Q969W1 377 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 FBXL17Q9UF56 701 aa14.11□□□□□ -0.15
KRT28-201ENST00000306658 H3BP45 60 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 VENTXO95231 258 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 SAA4P35542 130 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 RPL8P62917 257 aaKnown RBP14.1□□□□□ -0.15
KRT28-201ENST00000306658 EIF5AP63241 154 aaKnown RBP14.1□□□□□ -0.15
KRT28-201ENST00000306658 SPANXN5Q5MJ07 72 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.15
KRT28-201ENST00000306658 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 CFHR4Q92496 578 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 RITA1Q96K30 269 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 HIPK2Q9H2X6 1198 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 PAIP2BQ9ULR5 123 aaKnown RBP14.1□□□□□ -0.15
KRT28-201ENST00000306658 TCF19Q9Y242 345 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 VPS13CQ709C8 3753 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 TNCP24821 2201 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 SLC25A17O43808 307 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 JTBO76095 146 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 SULT1A1P50225 295 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 RPP30P78346 268 aaKnown RBP14.1□□□□□ -0.15
KRT28-201ENST00000306658 SPINK9Q5DT21 86 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 CLEC9AQ6UXN8 241 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 ST8SIA2Q92186 375 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 Q96MF0 132 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 SMIM3Q9BZL3 60 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 COMMD5Q9GZQ3 224 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 CYTL1Q9NRR1 136 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 ITGB1BP2Q9UKP3 347 aa14.1□□□□□ -0.15
KRT28-201ENST00000306658 STRAPQ9Y3F4 350 aaKnown RBP14.1□□□□□ -0.15
KRT28-201ENST00000306658 CSMD2Q7Z408 3487 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 IGHV1-69DA0A0B4J2H0 117 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 CST7O76096 145 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms