RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 UPK3AO75631 287 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF688P0C7X2 276 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 RPL29P47914 159 aaKnown RBP7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 PSG4Q00888 419 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 MEF2CQ06413 473 aaPredicted RBP7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 OPN4Q9UHM6 478 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 PPIAL4CA0A0B4J2A2 164 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 IGKV1D-16P01601 117 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 PPIAL4GP0DN37 164 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 POLR2GP62487 172 aaKnown RBP eCLIP7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 SEZ6L2Q6UXD5 910 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 DYRK2Q92630 601 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 ALX3O95076 343 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 MPC2O95563 127 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 CDS2O95674 445 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 ANOS1P23352 680 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 GAPTQ8N292 157 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 ADAT3Q96EY9 351 aaPredicted RBP7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 EAF1Q96JC9 268 aaPredicted RBP7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 YAE1D1Q9NRH1 226 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 CEACAM4O75871 244 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 MRPL54Q6P161 138 aaKnown RBP7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 ZNF385AQ96PM9 386 aaKnown RBP7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 ABHD1Q96SE0 405 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 C12orf57Q99622 126 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 OPN3Q9H1Y3 402 aaPredicted RBP7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.27
PCDHB1-201ENST00000306549 H3BRM9 83 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 KBTBD11O94819 623 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 ERVS71-1P61550 626 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 CA2P00918 260 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBMY1A1P0DJD3 496 aaKnown RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBMY1CP0DJD4 496 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 CTF1Q16619 201 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 C2orf83Q53S99 150 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 TCF24Q7RTU0 167 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RPL36A-HNRNPH2H7BZ11 118 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 MALP21145 153 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 IGFL3Q6UXB1 125 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 MRGPRFQ96AM1 343 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 PGLYRP3Q96LB9 341 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 CCL13Q99616 98 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 UMODP07911 640 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 MPV17P39210 176 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 GTSCR1Q86UQ5 136 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 TXNDC17Q9BRA2 123 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 ZNF729A6NN14 1252 aaPredicted RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 C3orf36Q3SXR2 165 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 C1QL3Q5VWW1 255 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 OR10AC1Q8NH08 325 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 KLF14Q8TD94 323 aaPredicted RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 C11orf68Q9H3H3 251 aaKnown RBP7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 TMEM186Q96B77 213 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 DTX4Q9Y2E6 619 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 MGAT2Q10469 447 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 FAM169BQ8N8A8 192 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 TMEM190Q8WZ59 177 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 NRIP2Q9BQI9 281 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 CLEC7AQ9BXN2 247 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 SIRT7Q9NRC8 400 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 FRRS1LQ9P0K9 344 aa7.14□□□□□ -1.27
PCDHB1-201ENST00000306549 RBM11P57052 281 aaKnown RBP7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 FAM27D1Q5T7N8 215 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 KIAA1549Q9HCM3 1950 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 SLC25A17O43808 307 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 CSRP3P50461 194 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 ZP3P21754 424 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 PGPA6NDG6 321 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 ZIC3O60481 467 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 CRPP02741 224 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 CD74P04233 296 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 GATA3P23771 443 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 KIR3DL3Q8N743 410 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 ADAD2Q8NCV1 583 aaKnown RBP7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 HIST1H4GQ99525 98 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 ZNF430Q9H8G1 570 aaPredicted RBP7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 MT-ND6P03923 174 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 CELA2AP08217 269 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 EGR1P18146 543 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 LHX2P50458 406 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 Q6ZS92 163 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 RNF167Q9H6Y7 350 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 CGB1A6NKQ9 187 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 NPIPB11E5RHQ5 1161 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 FABP2P12104 132 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 FCGR2BP31994 310 aaPredicted RBP7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
PCDHB1-201ENST00000306549 NPIPB9F8W1W9 429 aa7.12□□□□□ -1.27
PCDHB1-201ENST00000306549 TTC32Q5I0X7 151 aa7.12□□□□□ -1.27
PCDHB1-201ENST00000306549 LRP4O75096 1905 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms