RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MPDU1O75352 247 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 IGHV1-8P0DP01 117 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 RAB11AP62491 216 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 CCL20P78556 96 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 DLK1P80370 383 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 C4orf17Q53FE4 359 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 SPINK9Q5DT21 86 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.85■□□□□ 0.13
HOXC4-201ENST00000303406 C8orf46Q8TAG6 207 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 UNKLQ9H9P5 680 aaKnown RBP15.85■□□□□ 0.13
HOXC4-201ENST00000303406 FKBP11Q9NYL4 201 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 C17orf112F2Z3M2 114 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 H0YJW9 148 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 HSPB1P04792 205 aaKnown RBP15.84■□□□□ 0.13
HOXC4-201ENST00000303406 FGF7P21781 194 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 IL3RAP26951 378 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 HOXA1P49639 335 aaPredicted RBP15.84■□□□□ 0.13
HOXC4-201ENST00000303406 ZNF841Q6ZN19 808 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 PDPNQ86YL7 162 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 CLRN3Q8NCR9 226 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 ST6GALNAC6Q969X2 333 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 MRPL20Q9BYC9 149 aaKnown RBP15.84■□□□□ 0.13
HOXC4-201ENST00000303406 WDR83OSQ9Y284 106 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 PRSS46E5RG02 174 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 IFNA10P01566 189 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 KHDC3LQ587J8 217 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 ETV3LQ6ZN32 361 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 C11orf42Q8N5U0 333 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 OR10G4Q8NGN3 311 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 OR10X1Q8NGY0 326 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 OR4A5Q8NH83 315 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 CLDND2Q8NHS1 167 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 NABP2Q9BQ15 211 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 ENY2Q9NPA8 101 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 MIOXQ9UGB7 285 aa15.84■□□□□ 0.13
HOXC4-201ENST00000303406 FAM74A7A6NL05 159 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 FNDC10F2Z333 226 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 KBTBD11O94819 623 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 NPBWR1P48145 328 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 ERVFRD-1P60508 538 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 FAM74A3Q4VXF1 159 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 DTX2Q86UW9 622 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 ZNF709Q8N972 641 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 RCC1LQ96I51 464 aaKnown RBP15.83■□□□□ 0.12
HOXC4-201ENST00000303406 NPCDR1Q9BY65 106 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 TMEM133Q9H2Q1 129 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 VSIRQ9H7M9 311 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 OR51B2Q9Y5P1 312 aa15.83■□□□□ 0.12
HOXC4-201ENST00000303406 CD1BP29016 333 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 PRCDQ00LT1 54 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 ZNF726P1Q15940 193 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 ZNF787Q6DD87 383 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 OR5B3Q8NH48 314 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 ZNRD1Q9P1U0 126 aa15.82■□□□□ 0.12
HOXC4-201ENST00000303406 DIDO1Q9BTC0 2240 aaKnown RBP15.81■□□□□ 0.12
HOXC4-201ENST00000303406 LOC102723971A0A1B0GUV8 181 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 NDUFS6O75380 124 aaKnown RBP15.81■□□□□ 0.12
HOXC4-201ENST00000303406 IGKV1-16P04430 117 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 RAB13P51153 203 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 ICAM4Q14773 271 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 ABHD12Q8N2K0 398 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 SLC24A4Q8NFF2 622 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 OR8B3Q8NGG8 313 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 VSTM2AQ8TAG5 236 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 RAB1CQ92928 201 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 NEIL1Q96FI4 390 aaPredicted RBP15.81■□□□□ 0.12
HOXC4-201ENST00000303406 OR8B2Q96RD0 313 aa15.81■□□□□ 0.12
HOXC4-201ENST00000303406 YLPM1P49750 1951 aaKnown RBP15.8■□□□□ 0.12
HOXC4-201ENST00000303406 CTXND1A0A1B0GTU2 59 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 A0A1B0GV50 99 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 SRRM4A7MD48 611 aaKnown RBP15.8■□□□□ 0.12
HOXC4-201ENST00000303406 INS-IGF2F8WCM5 200 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 F12P00748 615 aaPredicted RBP15.8■□□□□ 0.12
HOXC4-201ENST00000303406 SRP19P09132 144 aaKnown RBP15.8■□□□□ 0.12
HOXC4-201ENST00000303406 NPY1RP25929 384 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 MC5RP33032 325 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 ACSM6Q6P461 480 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 OR4C13Q8NGP0 309 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 LHX4Q969G2 390 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 FLYWCH2Q96CP2 140 aaKnown RBP15.8■□□□□ 0.12
HOXC4-201ENST00000303406 TIMD4Q96H15 378 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 RARRES2Q99969 163 aa15.8■□□□□ 0.12
HOXC4-201ENST00000303406 MAP1LC3B2A6NCE7 125 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 LYNX1G3V0Z9 82 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 H7C2Y5 167 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 RRHO14718 337 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 TSPAN4O14817 238 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 IFNA1P01562 189 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 SAA1P0DJI8 122 aaPredicted RBP15.79■□□□□ 0.12
HOXC4-201ENST00000303406 LYNX1P0DP58 116 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 ELLP55199 621 aaPredicted RBP15.79■□□□□ 0.12
HOXC4-201ENST00000303406 TGIF2LXQ8IUE1 241 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 TMEM170AQ8WVE7 144 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 HARBI1Q96MB7 349 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 MAP1LC3BQ9GZQ8 125 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 PLEKHA3Q9HB20 300 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 KCNIP2Q9NS61 270 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 WASHC3Q9Y3C0 194 aa15.79■□□□□ 0.12
HOXC4-201ENST00000303406 USF1P22415 310 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 TAGLN2P37802 199 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms