RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 C8orf31Q8N9H6 132 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 LHX4Q969G2 390 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 REG4Q9BYZ8 158 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 IGHV2-26A0A0B4J1V2 119 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 TSPAN4O14817 238 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 IGFBP2P18065 325 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 RAB13P51153 203 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 F2RL1P55085 397 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 ARF6P62330 175 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 RUNX1Q01196 453 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 RELBQ01201 579 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 AGPAT2O15120 278 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 OR8U8P0C7N1 319 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 TNFRSF14Q92956 283 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 BARX1Q9HBU1 254 aaPredicted RBP11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 UBE2L5PA0A1B0GUS4 154 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 DLX1P56177 255 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 PARP11Q9NR21 331 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 TCF19Q9Y242 345 aa11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 AMMECR1Q9Y4X0 333 aaPredicted RBP11.83□□□□□ -0.52
SHCBP1-201ENST00000303383 A0A087X0M5 115 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 A0A1B0GX30 115 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 KRBOX1C9JBD0 128 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 H0YJW9 148 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 FGF2P09038 288 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 OR4C13Q8NGP0 309 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF596Q8TC21 504 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 OR4C12Q96R67 309 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 WASHC3Q9Y3C0 194 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 FBXO7Q9Y3I1 522 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 RPEQ96AT9 228 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 RBMXL1Q96E39 390 aaKnown RBP11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 EPG5Q9HCE0 2579 aa11.82□□□□□ -0.52
SHCBP1-201ENST00000303383 C1QL1O75973 258 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 IFNA4P05014 189 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 MC5RP33032 325 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 IL34Q6ZMJ4 242 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 MOB3BQ86TA1 216 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF429Q86V71 674 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 PDPNQ86YL7 162 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 PNKDQ8N490 385 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 NABP2Q9BQ15 211 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 SIRT7Q9NRC8 400 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 A0A1B0GV50 99 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 C22orf46C9J442 243 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 RBP4P02753 201 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 HSPE1P61604 102 aaKnown RBP11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 RAB11AP62491 216 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 DIAPH2-AS1Q14236 149 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 SMCO3A2RU48 225 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 OPN1MWP04001 364 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 OPN1MW2P0DN77 364 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 OPN1MW3P0DN78 364 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 HNF4GQ14541 408 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 HLA-DRB5Q30154 266 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 OR5AN1Q8NGI8 311 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 UQCC1Q9NVA1 299 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
SHCBP1-201ENST00000303383 IGHV3-72A0A0B4J1Y9 119 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 SAA1P0DJI8 122 aaPredicted RBP11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 EIF4E3Q8N5X7 224 aaKnown RBP11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 CCL19Q99731 98 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM147Q9BVK8 224 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 PLEKHA3Q9HB20 300 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 DOPEY1Q5JWR5 2465 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 GOSR1O95249 250 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 ZP3P21754 424 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 FHITP49789 147 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 POU2AF1Q16633 256 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms