RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 MS4A10Q96PG2 267 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
CTTN-201ENST00000301843 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
CTTN-201ENST00000301843 FAM90A26D6RGX4 464 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 GPR12P47775 334 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 WDR82Q6UXN9 313 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
CTTN-201ENST00000301843 TGIF2LYQ8IUE0 185 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 GBGT1Q8N5D6 347 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 F6UZH7 168 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 ZNF134P52741 427 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 TREML4Q6UXN2 200 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 Q8IYB0 196 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 TBX15Q96SF7 602 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 MGST2Q99735 147 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
CTTN-201ENST00000301843 ZDHHC11Q9H8X9 412 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
CTTN-201ENST00000301843 C21orf140B9A014 251 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 MBP02144 154 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 TCL1AP56279 114 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 EIF4EBP1Q13541 118 aaPredicted RBP11.23□□□□□ -0.61
CTTN-201ENST00000301843 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
CTTN-201ENST00000301843 LRRC29Q8WV35 223 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 MDFIC2A0A1B0GVS7 189 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 MKRN2OSH3BPM6 223 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 KITLGP21583 273 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 CDKN1AP38936 164 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
CTTN-201ENST00000301843 MRPL49Q13405 166 aaKnown RBP11.23□□□□□ -0.61
CTTN-201ENST00000301843 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 CENPVQ7Z7K6 275 aaPredicted RBP11.23□□□□□ -0.61
CTTN-201ENST00000301843 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 NAV3Q8IVL0 2385 aa11.23□□□□□ -0.61
CTTN-201ENST00000301843 LNP1A1A4G5 178 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 DUX4L9Q6RFH8 374 aaPredicted RBP11.22□□□□□ -0.61
CTTN-201ENST00000301843 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
CTTN-201ENST00000301843 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 RAB29O14966 203 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 TIMP3P35625 211 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 FXYD3Q14802 87 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 WDR83OSQ9Y284 106 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 KLRC4-KLRK1H3BQV0 150 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 WNT2P09544 360 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 SSTP61278 116 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 ZNF90Q03938 601 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 ELOVL5Q9NYP7 299 aa11.22□□□□□ -0.61
CTTN-201ENST00000301843 ZNF318Q5VUA4 2279 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 K7EN84 100 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 TNFSF15O95150 251 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 GCGP01275 180 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 IER3P46695 156 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 SOX8P57073 446 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.61
CTTN-201ENST00000301843 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
CTTN-201ENST00000301843 TMEM164Q5U3C3 297 aa11.21□□□□□ -0.61
CTTN-201ENST00000301843 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.62
CTTN-201ENST00000301843 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.62
CTTN-201ENST00000301843 ZNF124Q15973 351 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 MLANAQ16655 118 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.62
CTTN-201ENST00000301843 DEFB108BQ8NET1 73 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 GGTLC1Q9BX51 225 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.62
CTTN-201ENST00000301843 NAGKQ9UJ70 344 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 RNF114Q9Y508 228 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 PTPRBP23467 1997 aa11.21□□□□□ -0.62
CTTN-201ENST00000301843 IQCJQ1A5X6 159 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 NHLRC2Q8NBF2 726 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 OR4P4Q8NGL7 312 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 KLF13Q9Y2Y9 288 aaPredicted RBP11.2□□□□□ -0.62
CTTN-201ENST00000301843 TANC2Q9HCD6 1990 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 SERF1AO75920 110 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 CGAP01215 116 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 PDLIM4P50479 330 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 KRTCAP3Q53RY4 240 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 Q6ZWC4 215 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 VN1R17PQ8TDU5 208 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms