RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TNFSF14O43557 240 aa10.55□□□□□ -0.72
ABCA3-201ENST00000301732 TNFSF10P50591 281 aa10.55□□□□□ -0.72
ABCA3-201ENST00000301732 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
ABCA3-201ENST00000301732 SYT8Q8NBV8 401 aa10.55□□□□□ -0.72
ABCA3-201ENST00000301732 MCRIP2Q9BUT9 160 aaKnown RBP10.55□□□□□ -0.72
ABCA3-201ENST00000301732 ZNF430Q9H8G1 570 aaPredicted RBP10.55□□□□□ -0.72
ABCA3-201ENST00000301732 CXCL10P02778 98 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 CD55P08174 381 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 ZNF646O15015 1829 aaPredicted RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 TOPAZ1Q8N9V7 1692 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 DCAF10Q5QP82 559 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 CISD1Q9NZ45 108 aaKnown RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 KCNE5Q9UJ90 142 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 TRAV21A0A0B4J279 112 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 PRR32B1ATL7 298 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 SAMD13Q5VXD3 122 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 PNKDQ8N490 385 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 MARS2Q96GW9 593 aaKnown RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 TMEM70Q9BUB7 260 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 SLC22A18ASQ8N1D0 253 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 SPSB4Q96A44 273 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 NPFFO15130 113 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 GCHFRP30047 84 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 COX19Q49B96 90 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
ABCA3-201ENST00000301732 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
ABCA3-201ENST00000301732 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 BEND2Q8NDZ0 799 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 AQP3Q92482 292 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 ZNF708P17019 499 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 RPS11P62280 158 aaKnown RBP eCLIP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 TMEM74BQ9NUR3 256 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 DANCRP0C864 163 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 ADMP35318 185 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 TMEM183AQ8IXX5 376 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 SPOCK3Q9BQ16 436 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 LINC01560Q8TB33 94 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 POLEQ07864 2286 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 LOC390937A0A1W2PQ73 354 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 DRAM1Q8N682 238 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 ZFP36L2P47974 494 aaKnown RBP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 TMEM187Q14656 261 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
ABCA3-201ENST00000301732 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
ABCA3-201ENST00000301732 TOGARAM1Q9Y4F4 1720 aa10.52□□□□□ -0.72
ABCA3-201ENST00000301732 MIR17HGQ75NE6 70 aa10.52□□□□□ -0.72
ABCA3-201ENST00000301732 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.72
ABCA3-201ENST00000301732 RFNGQ9Y644 331 aa10.52□□□□□ -0.72
ABCA3-201ENST00000301732 SERF1AO75920 110 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 TMPRSS3P57727 454 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 DEPPQ9NTK1 212 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 A0A1W2PQD3 144 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 IL6RP08887 468 aaPredicted RBP10.52□□□□□ -0.73
ABCA3-201ENST00000301732 PCSK4Q6UW60 755 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 SLC25A28Q96A46 364 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 SCGB3A1Q96QR1 104 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 LAMB1P07942 1786 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 OR11H12B2RN74 326 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 OR11H1Q8NG94 326 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 OR51G1Q8NGK1 321 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 GVINP1Q7Z2Y8 2422 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 COL16A1Q07092 1604 aaPredicted RBP10.52□□□□□ -0.73
ABCA3-201ENST00000301732 TRBV7-9A0A0J9YWB2 115 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 GZMBP10144 247 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.73
ABCA3-201ENST00000301732 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
ABCA3-201ENST00000301732 LNP1A1A4G5 178 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 LIMS1P48059 325 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 RCC1LQ96I51 464 aaKnown RBP10.51□□□□□ -0.73
ABCA3-201ENST00000301732 VKORC1Q9BQB6 163 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 FBXL15Q9H469 300 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 HEATR1Q9H583 2144 aaKnown RBP10.51□□□□□ -0.73
ABCA3-201ENST00000301732 AQP10Q96PS8 301 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 MS4A5Q9H3V2 200 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 CXorf51AA0A1B0GTR3 108 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 ODAMA1E959 279 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 PEX7O00628 323 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 CD1AP06126 327 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 IGKV1D-43A0A0B4J1Z2 117 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 LEPP41159 167 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 EFNB1P98172 346 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
ABCA3-201ENST00000301732 ASCL5Q7RTU5 278 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms