RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 NDUFA2O43678 99 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 NEURL1O76050 574 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 C1QL4Q86Z23 238 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 DDA1Q9BW61 102 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 COL4A4P53420 1690 aaPredicted RBP11.2□□□□□ -0.62
CASC4-201ENST00000299957 ZNF503-AS2A6NEH8 195 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 MYOD1P15172 320 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 GZMHP20718 246 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 LHX2P50458 406 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 SELENOKQ9Y6D0 94 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 STARD4Q96DR4 205 aa11.2□□□□□ -0.62
CASC4-201ENST00000299957 IGLV3-32A0A0A0MS00 114 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 CGAP01215 116 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 ARL3P36405 182 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 CLDN18P56856 261 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
CASC4-201ENST00000299957 FDCSPQ8NFU4 85 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 MYO15AQ9UKN7 3530 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 ANAPC16Q96DE5 110 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 TCF19Q9Y242 345 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 ZNF729A6NN14 1252 aaPredicted RBP11.19□□□□□ -0.62
CASC4-201ENST00000299957 C9orf172C9J069 976 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 DYSFO75923 2080 aa11.19□□□□□ -0.62
CASC4-201ENST00000299957 SLC31A2O15432 143 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 USF1P22415 310 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 MYO9AB2RTY4 2548 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 IFNL4K9M1U5 179 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 GATCO43716 136 aaKnown RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 KRTCAP3Q53RY4 240 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 ZNF324BQ6AW86 544 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 MRPL18Q9H0U6 180 aaKnown RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 PROK2Q9HC23 129 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 SLC45A2Q9UMX9 530 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 BHLHA15Q7RTS1 189 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 MS4A5Q9H3V2 200 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 EML6Q6ZMW3 1958 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 MYO18BQ8IUG5 2567 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 C2orf16Q68DN1 1984 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 B4E171 279 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 SMPD2O60906 423 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 CECR9P0C854 216 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 TSPAN7P41732 249 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
CASC4-201ENST00000299957 LYZP61626 148 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 TNXAQ16473 311 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 HIST3H2BBQ8N257 126 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 TMEM256Q8N2U0 113 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 OR8G5Q8NG78 346 aa11.18□□□□□ -0.62
CASC4-201ENST00000299957 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CT45A6P0DMU7 189 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CT45A5P0DMU8 189 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CT45A7P0DMV0 189 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 TMEM183BQ1AE95 376 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CT45A1Q5HYN5 189 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 KIR3DL3Q8N743 410 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CT45A3Q8NHU0 189 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CORO2AQ92828 525 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 GMPPAQ96IJ6 420 aaPredicted RBP11.17□□□□□ -0.62
CASC4-201ENST00000299957 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
CASC4-201ENST00000299957 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 S4R3C0 116 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A10PA6NDY2 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A18PA6NE21 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A16PA6NEW6 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A20PA6NIJ5 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A8PA6NJQ4 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A7PA6NKC0 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A22PA8MWA6 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A12PA8MX19 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A5PA8MXJ8 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A23PA8MXZ1 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 PRRG2O14669 202 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CXorf1O96002 111 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A15PP0C7V4 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A13PP0C7W8 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A14PP0C7W9 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM90A24PP0C7X0 464 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
CASC4-201ENST00000299957 IGFBP2P18065 325 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms