RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ADTRPQ96IZ2 230 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 CHCHD2Q9Y6H1 151 aaPredicted RBP11.41□□□□□ -0.58
HPS3-201ENST00000296051 IGHMP01871 453 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 IFI6P09912 130 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 PF4V1P10720 104 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 PDLIM4P50479 330 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 ZNF137PP52743 207 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 MFAP2P55001 183 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 FAM57AQ8TBR7 257 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 DYNLRB2Q8TF09 96 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 ZNF524Q96C55 264 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 VSIRQ9H7M9 311 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 TGFAP01135 160 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
HPS3-201ENST00000296051 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
HPS3-201ENST00000296051 CFHR1Q03591 330 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 Q6ZT83 130 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 VKORC1L1Q8N0U8 176 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 KLF14Q8TD94 323 aaPredicted RBP11.41□□□□□ -0.58
HPS3-201ENST00000296051 LYZL4Q96KX0 146 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 SLC45A2Q9UMX9 530 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 M0QZK8 103 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 GGCTO75223 188 aaKnown RBP11.4□□□□□ -0.58
HPS3-201ENST00000296051 GFRA1P56159 465 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 ZNF124Q15973 351 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 TMEM210A6NLX4 147 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 SLC17A3O00476 420 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 PDE6DO43924 150 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 CD55P08174 381 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 CEACAM21Q3KPI0 293 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 RIPPLY2Q5TAB7 128 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 WNT5BQ9H1J7 359 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
HPS3-201ENST00000296051 IGKV3D-11A0A0A0MRZ8 115 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 TCF23Q7RTU1 214 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 ERASQ7Z444 233 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 SNRNP40Q96DI7 357 aaKnown RBP11.39□□□□□ -0.59
HPS3-201ENST00000296051 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
HPS3-201ENST00000296051 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 PXMP4Q9Y6I8 212 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 OR2H2O95918 312 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 CDKN1AP38936 164 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 LHFPL1Q86WI0 220 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
HPS3-201ENST00000296051 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 IL19Q9UHD0 177 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 PLAUP00749 431 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 LYZP61626 148 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 HIST3H2BBQ8N257 126 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 TM2D1Q9BX74 207 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 EFNA2O43921 213 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 S1PR2O95136 353 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 ABHD12Q8N2K0 398 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 CYYR1Q96J86 154 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 WNT10AQ9GZT5 417 aa11.39□□□□□ -0.59
HPS3-201ENST00000296051 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 IGHV1-69-2A0A0G2JMI3 117 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 C1QTNF9BB2RNN3 333 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 MGST3O14880 152 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 TNFRSF9Q07011 255 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 SPATA45Q537H7 98 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 P2RX4Q99571 388 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 MPV17P39210 176 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 B9A039 149 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 NTN3O00634 580 aaPredicted RBP11.38□□□□□ -0.59
HPS3-201ENST00000296051 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 HBZP02008 142 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 PPIAL4CA0A0B4J2A2 164 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
HPS3-201ENST00000296051 UCP3P55916 312 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 GABRA6Q16445 453 aa11.38□□□□□ -0.59
HPS3-201ENST00000296051 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 RHBDL1O75783 438 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 NPY1RP25929 384 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 TFPI2P48307 235 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
HPS3-201ENST00000296051 DRAM1Q8N682 238 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 OR4F17Q8NGA8 305 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 OR1L4Q8NGR5 311 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 OR5R1Q8NH85 324 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 NLRC5Q86WI3 1866 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 J3KRW8 73 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 HPRT1P00492 218 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 FOLR2P14207 255 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 ATP5G3P48201 142 aa11.37□□□□□ -0.59
HPS3-201ENST00000296051 TBR1Q16650 682 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms