RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SMAD7O15105 426 aaKnown RBP13.77□□□□□ -0.21
SSRP1-202ENST00000293880 DXOO77932 396 aaKnown RBP13.77□□□□□ -0.21
SSRP1-202ENST00000293880 FAM27BQ5VT28 67 aa13.77□□□□□ -0.21
SSRP1-202ENST00000293880 TMEM171Q8WVE6 324 aa13.77□□□□□ -0.21
SSRP1-202ENST00000293880 TMEM70Q9BUB7 260 aa13.77□□□□□ -0.21
SSRP1-202ENST00000293880 PIN1P1O15428 100 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 MFAP4P55083 255 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 FADS6Q8N9I5 356 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 DNASE2BQ8WZ79 361 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 DANCRP0C864 163 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
SSRP1-202ENST00000293880 TRAV8-4A0A0B4J246 113 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 NHLRC3Q5JS37 347 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 G6PC2Q9NQR9 355 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 CGAP01215 116 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 GCHFRP30047 84 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 LY75O60449 1722 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 RP1L1Q8IWN7 2480 aaPredicted RBP13.76□□□□□ -0.21
SSRP1-202ENST00000293880 M0R381 172 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
SSRP1-202ENST00000293880 SLC25A47Q6Q0C1 308 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 NABP2Q9BQ15 211 aa13.76□□□□□ -0.21
SSRP1-202ENST00000293880 OR11H12B2RN74 326 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 TMEM155Q4W5P6 130 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 TCF23Q7RTU1 214 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 OR11H1Q8NG94 326 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 ARID1AO14497 2285 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 TTC9CQ8N5M4 171 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 ZFC3H1O60293 1989 aaKnown RBP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 IGLV1-36A0A0B4J1U3 117 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 PPIAL4CA0A0B4J2A2 164 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 PQLC2LA1A4F0 135 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 PPIAL4GP0DN37 164 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 RNASE4P34096 147 aaKnown RBP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 DIRC2Q96SL1 478 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 PRDM6Q9NQX0 595 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 SF3B6Q9Y3B4 125 aaKnown RBP13.75□□□□□ -0.21
SSRP1-202ENST00000293880 A0A1W2PS18 150 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 TMEM50AO95807 157 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 PNKDQ8N490 385 aa13.75□□□□□ -0.21
SSRP1-202ENST00000293880 GCM2O75603 506 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 PRTN3P24158 256 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 CDCP2Q5VXM1 449 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 LHFPL4Q7Z7J7 247 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 POC1AQ8NBT0 407 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ZNF501Q96CX3 271 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 SAA1P0DJI8 122 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 SSBP4Q9BWG4 385 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 GTSF1LQ9H1H1 148 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ZP1P60852 638 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 CLEC2AQ6UVW9 174 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ATRAIDQ6UW56 229 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
SSRP1-202ENST00000293880 CA11O75493 328 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 ICAM4Q14773 271 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
SSRP1-202ENST00000293880 MPTX1A8MV57 137 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 GFI1BQ5VTD9 330 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 MRPS16Q9Y3D3 137 aaKnown RBP13.73□□□□□ -0.21
SSRP1-202ENST00000293880 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 TRBV5-7A0A0A0MS05 114 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 A0A1W2PQF6 199 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 ATP5G3P48201 142 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 C2orf68Q2NKX9 166 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 KCNE5Q9UJ90 142 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 WDR82Q6UXN9 313 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 KLF14Q8TD94 323 aaPredicted RBP13.73□□□□□ -0.21
SSRP1-202ENST00000293880 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 FAM201AQ5SY85 155 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 TOMM7Q9P0U1 55 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 SPAG17Q6Q759 2223 aa13.73□□□□□ -0.21
SSRP1-202ENST00000293880 ODAMA1E959 279 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 IGFBP2P18065 325 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 DCTN5Q9BTE1 182 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
SSRP1-202ENST00000293880 HIST1H4AP62805 103 aaKnown RBP13.72□□□□□ -0.21
SSRP1-202ENST00000293880 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
SSRP1-202ENST00000293880 PCSK4Q6UW60 755 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 DRAM1Q8N682 238 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms