RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 RBP4P02753 201 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 COX5BP10606 129 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 ADCYAP1P18509 176 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 NPY1RP25929 384 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 SRSF6Q13247 344 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 UNC119Q13432 240 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 IGFL3Q6UXB1 125 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 MOGAT3Q86VF5 341 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 OR5A2Q8NGI9 324 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 APOBEC3AP31941 199 aaPredicted RBP9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 RIPPLY3P57055 190 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 MDS2Q8NDY4 140 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 SSC4DQ8WTU2 575 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 FAM222BQ8WU58 562 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 GNB4Q9HAV0 340 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 GPR179Q6PRD1 2367 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 A8MWL6 223 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 SERF1AO75920 110 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 S1PR2O95136 353 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 AMY1AP04745 511 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 S100A4P26447 101 aaKnown RBP9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 ICAM4Q14773 271 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 SHISA5Q8N114 240 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 RTBDNQ9BSG5 229 aaPredicted RBP9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 IL36GQ9NZH8 169 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 NPIPB13A6NJU9 1138 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 NPIPB4C9JG80 1138 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 IL11P20809 199 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 LHX2P50458 406 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 PRRX1P54821 245 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 CLDN18P56856 261 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 CCL20P78556 96 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 OR4S2Q8NH73 311 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 DEPPQ9NTK1 212 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 IL36RNQ9UBH0 155 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 CACNA1HO95180 2353 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 J3QW42 95 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 GAS1P54826 345 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 CDC42EP3Q9UKI2 254 aa9.67□□□□□ -0.86
NPC1L1-201ENST00000289547 PPIAL4EA0A075B759 164 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PPIAL4DF5H284 164 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 SS18L1O75177 396 aaPredicted RBP9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 IGHV2-70P01814 119 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PPIAL4FP0DN26 164 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 MAS1LP35410 378 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 Q0VFX4 171 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 MIC13Q5XKP0 118 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PRDM13Q9H4Q3 707 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 G6PC2Q9NQR9 355 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PPIAL4AQ9Y536 164 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PGLYRP1O75594 196 aaPredicted RBP9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 FAM27E3Q08E93 113 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 SLC25A47Q6Q0C1 308 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 C9orf106Q8NAJ2 232 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 SCN2AQ99250 2005 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 TRBV9A0A0B4J1U6 114 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 SNAI2O43623 268 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 CEBPDP49716 269 aaPredicted RBP9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 ZNF664Q8N3J9 261 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM70Q9BUB7 260 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 C3orf80F5H4A9 247 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 SLC17A3O00476 420 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 EREGO14944 169 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 PSG4Q00888 419 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 FAM216AQ8WUB2 273 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
NPC1L1-201ENST00000289547 MS4A18H0YCH9 400 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 SYNGR3O43761 229 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 MS4A18Q3C1V0 323 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 RNF122Q9H9V4 155 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 A0A087WV48 116 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 VMA21Q3ZAQ7 101 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 FAM206AQ9NX38 181 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 GNG7O60262 68 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 MPDU1O75352 247 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 CRYBB3P26998 211 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 CA7P43166 264 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 UCP3P55916 312 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 CYTL1Q9NRR1 136 aa9.65□□□□□ -0.86
NPC1L1-201ENST00000289547 ZG16O60844 167 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms