RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PMS2CLQ68D20 193 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 FMC1Q96HJ9 113 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 R4GN57 208 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 CCL13Q99616 98 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 ZNF562Q6V9R5 426 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 MED13LQ71F56 2210 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 A0A1B0GTL3 188 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM86BQ8N661 226 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 GRIFINA4D1Z8 144 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 CIARTQ8N365 385 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-201ENST00000282516 CCL19Q99731 98 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 ELF5Q9UKW6 265 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-201ENST00000282516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-201ENST00000282516 APOMO95445 188 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 ISG15P05161 165 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 MPV17P39210 176 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 SIGLEC5O15389 551 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CBLN1P23435 193 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 GREB1Q4ZG55 1949 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 FGF12P61328 243 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 OR10J3Q5JRS4 329 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 ODAMA1E959 279 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 PGPEP1LA6NFU8 196 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 F8WEM9 126 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 BGLAPP02818 100 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 GPR183P32249 361 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CD69Q07108 199 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 MGAT2Q10469 447 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 OR4X2Q8NGF9 303 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
NIPBL-201ENST00000282516 ATP5J2P56134 94 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 LHX8Q68G74 356 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CBLN3Q6UW01 205 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 OR11H4Q8NGC9 324 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CHODLQ9H9P2 273 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CCL8P80075 99 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 ELOVL5Q9NYP7 299 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 C9JCJ5 164 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 SPINK2P20155 84 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 RNASEH2CQ8TDP1 164 aaKnown RBP7.52□□□□□ -1.21
NIPBL-201ENST00000282516 C5orf30Q96GV9 206 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 GGACTQ9BVM4 153 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 CALYQ9NYX4 217 aa7.52□□□□□ -1.21
NIPBL-201ENST00000282516 NCKAP5O14513 1909 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 M0R381 172 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 CTGFP29279 349 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 ATXN8Q156A1 80 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM249Q2WGJ8 235 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 HMGCLL1Q8TB92 370 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 GPX4P36969 197 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-201ENST00000282516 SRSF6Q13247 344 aaKnown RBP7.51□□□□□ -1.21
NIPBL-201ENST00000282516 PUSL1Q8N0Z8 303 aaKnown RBP7.51□□□□□ -1.21
NIPBL-201ENST00000282516 C18orf15Q96N68 181 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 PEX7O00628 323 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 LEPP41159 167 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 ZFAND6Q6FIF0 208 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 OVOL2Q9BRP0 275 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 RPP21Q9H633 154 aaKnown RBP7.51□□□□□ -1.21
NIPBL-201ENST00000282516 CD300CQ08708 224 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 FAM27BQ5VT28 67 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 PRSS41Q7RTY9 318 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-201ENST00000282516 A0A1W2PP11 408 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 DMRTA1Q5VZB9 504 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 PTPRQQ9UMZ3 2332 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 NDUFA3O95167 84 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 SSC4DQ8WTU2 575 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 SMIM8Q96KF7 97 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 GCHFRP30047 84 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 CYB5R2Q6BCY4 276 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 IDI2-AS1Q9NZ38 188 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 C3AR1Q16581 482 aa7.51□□□□□ -1.21
NIPBL-201ENST00000282516 H0YL77 283 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 SNRPCP09234 159 aaKnown RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 DCAF10Q5QP82 559 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 LINC01555Q8NAE3 123 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 ANK1P16157 1881 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 CCL3P10147 92 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 ORMDL3Q8N138 153 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 OR9G1Q8NH87 305 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 CXCL16Q9H2A7 254 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 RNF115Q9Y4L5 304 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 DANCRP0C864 163 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 HSPE1P61604 102 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms