RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
CD44-203ENST00000278386 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 OR51E2Q9H255 320 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 DCSTAMPQ9H295 470 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 SRD5A3Q9H8P0 318 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 TAS2R8Q9NYW2 309 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 DAPK2Q9UIK4 370 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 FBXL7Q9UJT9 491 aa9.66□□□□□ -0.86
CD44-203ENST00000278386 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 TEX22C9J3V5 150 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 GGCTO75223 188 aaKnown RBP9.65□□□□□ -0.86
CD44-203ENST00000278386 CD7P09564 240 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 EDN2P20800 178 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 ARL3P36405 182 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 ARPC4P59998 168 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 TXNL4BQ9NX01 149 aaKnown RBP9.65□□□□□ -0.86
CD44-203ENST00000278386 ANXA10Q9UJ72 324 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 RRP15Q9Y3B9 282 aaKnown RBP9.65□□□□□ -0.86
CD44-203ENST00000278386 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 S4R3C0 116 aa9.65□□□□□ -0.86
CD44-203ENST00000278386 NPIPB5A8MRT5 1133 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 TNFSF12O43508 249 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 DHFRP00374 187 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 FOLR2P14207 255 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 MECP2P51608 486 aaKnown RBP9.64□□□□□ -0.87
CD44-203ENST00000278386 SFXN4Q6P4A7 337 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
CD44-203ENST00000278386 TMEM167AQ8TBQ9 72 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 SECTM1Q8WVN6 248 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 CACNG8Q8WXS5 425 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 WDR89Q96FK6 387 aaPredicted RBP9.64□□□□□ -0.87
CD44-203ENST00000278386 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 HIPK2Q9H2X6 1198 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 RHBDL2Q9NX52 303 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 RAB26Q9ULW5 256 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
CD44-203ENST00000278386 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 SSX5O60225 188 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 JTBO76095 146 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 OR2C1O95371 312 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 HRASP01112 189 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 REG1AP05451 166 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
CD44-203ENST00000278386 DEFA4P12838 97 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 AREGP15514 252 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 FGF9P31371 208 aaPredicted RBP9.63□□□□□ -0.87
CD44-203ENST00000278386 MAS1LP35410 378 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 UBE2UQ5VVX9 321 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 ZNF66Q6ZN08 573 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 MFSD4AQ8N468 514 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 EEF1AKMT3Q96AZ1 226 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 CCDC140Q96MF4 163 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 HRASLSQ9HDD0 168 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 SLC2A9Q9NRM0 540 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 TECRQ9NZ01 308 aaKnown RBP9.63□□□□□ -0.87
CD44-203ENST00000278386 SSR3Q9UNL2 185 aa9.63□□□□□ -0.87
CD44-203ENST00000278386 ZNF320A2RRD8 509 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 ZNF785A8K8V0 405 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 E7EUB6 86 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 LGALS9O00182 355 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 MRPS14O60783 128 aaKnown RBP9.62□□□□□ -0.87
CD44-203ENST00000278386 NDUFB8O95169 186 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 ZNF735P0CB33 412 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 MYOD1P15172 320 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 PSMB6P28072 239 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 RPL8P62917 257 aaKnown RBP9.62□□□□□ -0.87
CD44-203ENST00000278386 MXD1Q05195 221 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 SLC16A13Q7RTY0 426 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 TPRA1Q86W33 373 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 BEST4Q8NFU0 473 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 OR13F1Q8NGS4 319 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 IL17DQ8TAD2 202 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 FCGR1BQ92637 280 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 ZC4H2Q9NQZ6 224 aa9.62□□□□□ -0.87
CD44-203ENST00000278386 A0A1B0GW64 132 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 RBMY1BA6NDE4 496 aaKnown RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 RBMY1EA6NEQ0 496 aaKnown RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 FCER2P06734 321 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 RBMY1DP0C7P1 496 aaKnown RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 PTHLHP12272 177 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 HIST1H1BP16401 226 aaKnown RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 HLA-GP17693 338 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 FCGR2CP31995 323 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 FXYD4P59646 89 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 CATR1Q13166 79 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 TIMM50Q3ZCQ8 353 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 FAM106AQ4KMX7 169 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 ZNF57Q68EA5 555 aaPredicted RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 OR4A47Q6IF82 309 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
CD44-203ENST00000278386 SPAG16Q8N0X2 631 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 SPARTQ8N0X7 666 aa9.61□□□□□ -0.87
CD44-203ENST00000278386 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms