RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FCGR2AP12318 317 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 COX5AP20674 150 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 Q6ZPA2 131 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 BPIFA4PQ86YQ2 179 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 C10orf35Q96D05 121 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 MED12LQ86YW9 2145 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 PRKNO60260 465 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-201ENST00000274071 PF4V1P10720 104 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 FABP2P12104 132 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 AESQ08117 197 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SLC38A11Q08AI6 406 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SGCBQ16585 318 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 RNASEKQ6P5S7 137 aaKnown RBP7.72□□□□□ -1.17
PDGFC-201ENST00000274071 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 VSTM2LQ96N03 204 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM140Q9NV12 185 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 C1RLQ9NZP8 487 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 B4GALT7Q9UBV7 327 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 ZNF257Q9Y2Q1 563 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 A0A1W2PP55 124 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 CA1P00915 261 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SMIM10L1P0DMW3 83 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 WFDC2Q14508 124 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 FAM120AOSQ5T036 256 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 LHFPL2Q6ZUX7 228 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 PRSS41Q7RTY9 318 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM251Q8N6I4 163 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 BCORP1Q8N888 145 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 ELSPBP1Q96BH3 223 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SMIM10Q96HG1 83 aa7.72□□□□□ -1.17
PDGFC-201ENST00000274071 MCRIP2Q9BUT9 160 aaKnown RBP7.72□□□□□ -1.17
PDGFC-201ENST00000274071 SH2D7A6NKC9 451 aaPredicted RBP7.71□□□□□ -1.17
PDGFC-201ENST00000274071 AMY1AP04745 511 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 CEACAM5P06731 702 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 COX8AP10176 69 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 IL12BP29460 328 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 TCL1AP56279 114 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 ZNF121P58317 390 aaPredicted RBP7.71□□□□□ -1.17
PDGFC-201ENST00000274071 COX19Q49B96 90 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 WDR5BQ86VZ2 330 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 OOSP2Q86WS3 158 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 OR1L1Q8NH94 360 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 OR2D2Q9H210 308 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 RALGAPA1Q6GYQ0 2036 aa7.71□□□□□ -1.17
PDGFC-201ENST00000274071 ATXN8OSP0DMR3 200 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 CFHR2P36980 270 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 DAP3P51398 398 aaKnown RBP7.71□□□□□ -1.18
PDGFC-201ENST00000274071 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 RTTNQ86VV8 2226 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 TRIOO75962 3097 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 TRAV36DV7A0A075B6V5 113 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 LOC102723996A0A087X1L8 192 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 E9PLN8 166 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 GNG4P50150 75 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 ZNF585BQ52M93 769 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 SH2D6Q7Z4S9 175 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 PIGTQ969N2 578 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 HARBI1Q96MB7 349 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.18
PDGFC-201ENST00000274071 TRAV38-1A0A0B4J264 116 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 HELTA6NFD8 242 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 ANGPTL7O43827 346 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 CLDN14O95500 239 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 MGST1P10620 155 aaKnown RBP7.7□□□□□ -1.18
PDGFC-201ENST00000274071 ARL3P36405 182 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 KIR2DL1P43626 348 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-201ENST00000274071 INSL3P51460 131 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 CCL7P80098 99 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 PRR31Q5SQ13 230 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 SAMD5Q5TGI4 173 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 ZNF611Q8N823 705 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 OR10X1Q8NGY0 326 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 C5orf30Q96GV9 206 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 SH2D2AQ9NP31 389 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 CACNG5Q9UF02 275 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 R4GN57 208 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 IGKV1D-13A0A0B4J2D9 117 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 A0A0J9YY10 115 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 A0A1B0GX78 115 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 C5orf63A6NC05 138 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 H3BMH7 237 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 HBZP02008 142 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 IGKV1-13P0DP09 117 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 CCL1P22362 96 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 ATP5J2P56134 94 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 RPL8P62917 257 aaKnown RBP7.7□□□□□ -1.18
PDGFC-201ENST00000274071 SRSF6Q13247 344 aaKnown RBP7.7□□□□□ -1.18
PDGFC-201ENST00000274071 ETDBQ3ZM63 59 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 FNDC7Q5VTL7 733 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 DHRS13Q6UX07 377 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 OR10D3Q8NH80 312 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 DDB2Q92466 427 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 URB1-AS1Q96HZ7 61 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms