RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
SF3B4-201ENST00000271628 COL8A2P25067 703 aa12.57□□□□□ -0.4
SF3B4-201ENST00000271628 RUNX1Q01196 453 aa12.57□□□□□ -0.4
SF3B4-201ENST00000271628 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
SF3B4-201ENST00000271628 TRBV23-1A0A0A0MS06 115 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 hCG_1809904A0A1W2PP81 198 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 A0A1W2PR64 198 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 A0A1W2PRV1 198 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 ICAM4Q14773 271 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 HAGHQ16775 308 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 SPANXN5Q5MJ07 72 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 UTF1Q5T230 341 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 SLC25A24Q6NUK1 477 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 OR10G4Q8NGN3 311 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 CLDND2Q8NHS1 167 aa12.56□□□□□ -0.4
SF3B4-201ENST00000271628 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
SF3B4-201ENST00000271628 NBASA2RRP1 2371 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 CCL3L1P16619 93 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 B2MP61769 119 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 AARDQ4LEZ3 155 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
SF3B4-201ENST00000271628 C8orf31Q8N9H6 132 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 CXorf65A6NEN9 183 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 METTL15P1P0C7V9 234 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 GNLYP22749 145 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 TMEM267Q0VDI3 215 aaPredicted RBP12.55□□□□□ -0.4
SF3B4-201ENST00000271628 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 THNSL2Q86YJ6 484 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 OR4A16Q8NH70 328 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 DTD1Q8TEA8 209 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 NEU4Q8WWR8 484 aaPredicted RBP12.55□□□□□ -0.4
SF3B4-201ENST00000271628 ITLN2Q8WWU7 325 aaPredicted RBP12.55□□□□□ -0.4
SF3B4-201ENST00000271628 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
SF3B4-201ENST00000271628 RALYQ9UKM9 306 aaKnown RBP12.55□□□□□ -0.4
SF3B4-201ENST00000271628 OR8U8P0C7N1 319 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 OR52E5Q8NH55 327 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 TVP23CQ96ET8 276 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
SF3B4-201ENST00000271628 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
SF3B4-201ENST00000271628 AP4M1O00189 453 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 HRASP01112 189 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 IGHV2-70P01814 119 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
SF3B4-201ENST00000271628 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 LRBAP50851 2863 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 SERF2P84101 59 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 TMEM155Q4W5P6 130 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 C11orf71Q6IPW1 123 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 LINC00311Q8N616 119 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 CEBPZOSA8MTT3 80 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 B4DEV8 164 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 OR9G9P0C7N8 305 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 OR2B8PP59922 312 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 ZNF833PQ6ZTB9 187 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 SSX9Q7RTT3 188 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 LILRB2Q8N423 598 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
SF3B4-201ENST00000271628 A0A087X0M5 115 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 A0A1B0GX30 115 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 ERVFRD-1P60508 538 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 SPCS3P61009 180 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 DLK1P80370 383 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 ATP6V1FQ16864 119 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 RTL8BQ17RB0 113 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.4
SF3B4-201ENST00000271628 FAM71F2Q6NXP2 309 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 DTX2Q86UW9 622 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 ZNF596Q8TC21 504 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 TMEM186Q96B77 213 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 TIMD4Q96H15 378 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 RHOVQ96L33 236 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.4
SF3B4-201ENST00000271628 TMEM140Q9NV12 185 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 MIOXQ9UGB7 285 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 PKD1L2Q7Z442 2459 aa12.52□□□□□ -0.4
SF3B4-201ENST00000271628 LOC102723971A0A1B0GUV8 181 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 CT45A6P0DMU7 189 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 CT45A5P0DMU8 189 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 CT45A7P0DMV0 189 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.41
SF3B4-201ENST00000271628 POU2AF1Q16633 256 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 MBD3L1Q8WWY6 194 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 RAB1CQ92928 201 aa12.52□□□□□ -0.41
SF3B4-201ENST00000271628 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.41
SF3B4-201ENST00000271628 J3QR06 171 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 PLA2G5P39877 138 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 CEBPGP53567 150 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 DLX6P56179 175 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 RELBQ01201 579 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
SF3B4-201ENST00000271628 ZNF841Q6ZN19 808 aa12.51□□□□□ -0.41
SF3B4-201ENST00000271628 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms