RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 HOXC12P31275 282 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 KIR2DL2P43627 348 aaPredicted RBP18.35■□□□□ 0.53
CDR2-201ENST00000268383 CCL11P51671 97 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 MSMPQ1L6U9 139 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 SMIM21Q3B7S5 101 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 FAM201AQ5SY85 155 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 A8MWP6 167 aa18.34■□□□□ 0.53
CDR2-201ENST00000268383 LURAP1Q96LR2 239 aa18.34■□□□□ 0.53
CDR2-201ENST00000268383 IGKV1D-17A0A075B6S4 117 aa18.34■□□□□ 0.53
CDR2-201ENST00000268383 SGMS2Q8NHU3 365 aa18.34■□□□□ 0.53
CDR2-201ENST00000268383 TRAPPC1Q9Y5R8 145 aa18.34■□□□□ 0.53
CDR2-201ENST00000268383 GCH1P30793 250 aa18.33■□□□□ 0.53
CDR2-201ENST00000268383 SRP14P37108 136 aaKnown RBP18.33■□□□□ 0.53
CDR2-201ENST00000268383 TNFSF10P50591 281 aa18.33■□□□□ 0.53
CDR2-201ENST00000268383 CNN1P51911 297 aaKnown RBP18.33■□□□□ 0.53
CDR2-201ENST00000268383 PXMP4Q9Y6I8 212 aa18.33■□□□□ 0.53
CDR2-201ENST00000268383 GRIFINA4D1Z8 144 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 NKX2-8O15522 239 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 VENTXO95231 258 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 USF2Q15853 346 aaPredicted RBP18.33■□□□□ 0.52
CDR2-201ENST00000268383 MORN2Q502X0 79 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 PDLIM3Q53GG5 364 aaPredicted RBP18.33■□□□□ 0.52
CDR2-201ENST00000268383 DNLZQ5SXM8 178 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 KCNIP4Q6PIL6 250 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 TMEM178AQ8NBL3 297 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 C1orf159Q96HA4 380 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 ACY3Q96HD9 319 aa18.33■□□□□ 0.52
CDR2-201ENST00000268383 DMXL2Q8TDJ6 3036 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 PDLIM4P50479 330 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 RPL15P61313 204 aaKnown RBP18.32■□□□□ 0.52
CDR2-201ENST00000268383 CISD2Q8N5K1 135 aaKnown RBP18.32■□□□□ 0.52
CDR2-201ENST00000268383 PRR7Q8TB68 274 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 FOXH1O75593 365 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 FAM122AQ96E09 287 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 IMMP2LQ96T52 175 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 GGTLC1Q9BX51 225 aa18.32■□□□□ 0.52
CDR2-201ENST00000268383 YTHDF2Q9Y5A9 579 aaKnown RBP18.32■□□□□ 0.52
CDR2-201ENST00000268383 DIRC2Q96SL1 478 aa18.31■□□□□ 0.52
CDR2-201ENST00000268383 OPN3Q9H1Y3 402 aaPredicted RBP18.31■□□□□ 0.52
CDR2-201ENST00000268383 SEPSECSQ9HD40 501 aaKnown RBP18.31■□□□□ 0.52
CDR2-201ENST00000268383 CACNA1HO95180 2353 aa18.31■□□□□ 0.52
CDR2-201ENST00000268383 GFRA3O60609 400 aa18.31■□□□□ 0.52
CDR2-201ENST00000268383 FRMD6-AS1P0C7T7 363 aa18.31■□□□□ 0.52
CDR2-201ENST00000268383 OCC1Q8TAD7 63 aa18.31■□□□□ 0.52
CDR2-201ENST00000268383 PDE6DO43924 150 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 TYMSP04818 313 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 VDAC2P45880 294 aaPredicted RBP18.3■□□□□ 0.52
CDR2-201ENST00000268383 DUX4L9Q6RFH8 374 aaPredicted RBP18.3■□□□□ 0.52
CDR2-201ENST00000268383 SFRP2Q96HF1 295 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 TMEM140Q9NV12 185 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 SLC17A3O00476 420 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 HPRT1P00492 218 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 PAX1P15863 534 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 RELBQ01201 579 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 HLA-DRB5Q30154 266 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 FDCSPQ8NFU4 85 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 TMEM18Q96B42 140 aa18.3■□□□□ 0.52
CDR2-201ENST00000268383 IGHV2OR16-5A0A0B4J2B6 119 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 IGHV1-18A0A0C4DH31 117 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 MKRN2OSH3BPM6 223 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 ZNF718Q3SXZ3 478 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 TMEM144Q7Z5S9 345 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 GBGT1Q8N5D6 347 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 HINT2Q9BX68 163 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 KCNIP2Q9NS61 270 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 F6UZH7 168 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 SPCS3P61009 180 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 VHLLQ6RSH7 139 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 PRSS46E5RG02 174 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 SCGB1D1O95968 90 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 ADMP35318 185 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 PAX5Q02548 391 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 TEX38Q6PEX7 206 aa18.29■□□□□ 0.52
CDR2-201ENST00000268383 ADH4P08319 380 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 HTD2P86397 168 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 ARSJQ5FYB0 599 aaPredicted RBP18.28■□□□□ 0.52
CDR2-201ENST00000268383 FAM90A1Q86YD7 464 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 IFI27L2Q9H2X8 130 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 ELOVL5Q9NYP7 299 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 TCF19Q9Y242 345 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 EREGO14944 169 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 TMPRSS2O15393 492 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 ACTL6BO94805 426 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 STAG3L2P0CL84 134 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 STAG3L3P0CL85 134 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 KITLGP21583 273 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 LOXL3P58215 753 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 TCTEX1D1Q8N7M0 179 aa18.28■□□□□ 0.52
CDR2-201ENST00000268383 MDFIC2A0A1B0GVS7 189 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 GCGP01275 180 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 SP9P0CG40 484 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 CBLN1P23435 193 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 OPRK1P41145 380 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 MOB3BQ86TA1 216 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 S1PR3Q99500 378 aa18.27■□□□□ 0.52
CDR2-201ENST00000268383 GUSBP1Q15486 140 aa18.27■□□□□ 0.51
CDR2-201ENST00000268383 GCSAMQ8N6F7 178 aa18.27■□□□□ 0.51
CDR2-201ENST00000268383 ATG101Q9BSB4 218 aa18.27■□□□□ 0.51
CDR2-201ENST00000268383 K7EN84 100 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms