RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
TPM1-201ENST00000267996 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 IFNA17P01571 189 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 ARG1P05089 322 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 SAA1P0DJI8 122 aaPredicted RBP13.22□□□□□ -0.29
TPM1-201ENST00000267996 HTR1DP28221 377 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 VDAC2P45880 294 aaPredicted RBP13.22□□□□□ -0.29
TPM1-201ENST00000267996 HSPE1P61604 102 aaKnown RBP13.22□□□□□ -0.29
TPM1-201ENST00000267996 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
TPM1-201ENST00000267996 SPANXN5Q5MJ07 72 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 FAM74A1Q5RGS3 127 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 TPTE2P1Q5T6R2 138 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 INSIG2Q9Y5U4 225 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 TACC2O95359 2948 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 TNCP24821 2201 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
TPM1-201ENST00000267996 IGHV4-30-2A0A087WSY4 118 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 A0A1W2PPI3 338 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 LEUTXA8MZ59 168 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 METTL15P1P0C7V9 234 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 COL8A1P27658 744 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 KLRD1Q13241 179 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 ZNF266Q14584 549 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 ZNF787Q6DD87 383 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
TPM1-201ENST00000267996 TMEM217Q8N7C4 229 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 RPEQ96AT9 228 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 PERPQ96FX8 193 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 MS4A7Q9GZW8 240 aaPredicted RBP13.21□□□□□ -0.29
TPM1-201ENST00000267996 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
TPM1-201ENST00000267996 FAM157AC9JC47 383 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 FGF16O43320 207 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 KBTBD11O94819 623 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 FAM157CP0CG43 387 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 HOXB4P17483 251 aaPredicted RBP13.21□□□□□ -0.3
TPM1-201ENST00000267996 LGALS7P47929 136 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 CLINT1Q14677 625 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 OR4A5Q8NH83 315 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 ATP5SQ99766 215 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 STRAPQ9Y3F4 350 aaKnown RBP13.21□□□□□ -0.3
TPM1-201ENST00000267996 CRYBG3Q68DQ2 2970 aa13.21□□□□□ -0.3
TPM1-201ENST00000267996 PTPN13Q12923 2485 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 CEACAM3P40198 252 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 DVL1P1P54792 670 aaPredicted RBP13.2□□□□□ -0.3
TPM1-201ENST00000267996 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
TPM1-201ENST00000267996 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 MOB3BQ86TA1 216 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 TBX15Q96SF7 602 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 MED9Q9NWA0 146 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 FBN2P35556 2912 aa13.2□□□□□ -0.3
TPM1-201ENST00000267996 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 DFFBO76075 338 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 FGF2P09038 288 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 SEC11BP0C7V7 166 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 SPP1P10451 314 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 USF1P22415 310 aaPredicted RBP13.19□□□□□ -0.3
TPM1-201ENST00000267996 HABP2Q14520 560 aaPredicted RBP13.19□□□□□ -0.3
TPM1-201ENST00000267996 MINOS1Q5TGZ0 78 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 RITA1Q96K30 269 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 OR51B2Q9Y5P1 312 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 MINOS1-NBL1R4GNA1 71 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
TPM1-201ENST00000267996 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 TOX4O94842 621 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 KRTAP10-9P60411 292 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 HBG1P69891 147 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 HBG2P69892 147 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 RNF5Q99942 180 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 ASH1LQ9NR48 2969 aaKnown RBP13.18□□□□□ -0.3
TPM1-201ENST00000267996 TEX50A0A1B0GTY4 177 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 OOSP1A8MZH6 123 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 FBXO24O75426 580 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
TPM1-201ENST00000267996 SULT1A2P50226 295 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 PAX8Q06710 450 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 LHFPL4Q7Z7J7 247 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 THNSL2Q86YJ6 484 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 CFHR4Q92496 578 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms