RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MLANAQ16655 118 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 TMEM170AQ8WVE7 144 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 FAM103A1Q9BTL3 118 aaKnown RBP13.94□□□□□ -0.18
SQLE-201ENST00000265896 TMEM250H0YL14 139 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 GNG10P50151 68 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 LHFPL4Q7Z7J7 247 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 OCC1Q8TAD7 63 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 SNRNP40Q96DI7 357 aaKnown RBP13.94□□□□□ -0.18
SQLE-201ENST00000265896 KLF13Q9Y2Y9 288 aaPredicted RBP13.94□□□□□ -0.18
SQLE-201ENST00000265896 YTHDF2Q9Y5A9 579 aaKnown RBP13.94□□□□□ -0.18
SQLE-201ENST00000265896 NAV3Q8IVL0 2385 aa13.94□□□□□ -0.18
SQLE-201ENST00000265896 ANKRD11Q6UB99 2663 aaPredicted RBP13.94□□□□□ -0.18
SQLE-201ENST00000265896 ADMP35318 185 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 TREML4Q6UXN2 200 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 AGMATQ9BSE5 352 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 PXMP4Q9Y6I8 212 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 CECR9P0C854 216 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 P0C879 139 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 MSMPQ1L6U9 139 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 ACOT6Q3I5F7 207 aaPredicted RBP13.93□□□□□ -0.18
SQLE-201ENST00000265896 Q8IYB0 196 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 MGST2Q99735 147 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
SQLE-201ENST00000265896 OPN3Q9H1Y3 402 aaPredicted RBP13.93□□□□□ -0.18
SQLE-201ENST00000265896 HOXC12P31275 282 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 FXYD3Q14802 87 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 NHLRC2Q8NBF2 726 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 FAM216AQ8WUB2 273 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 A6NNC1 897 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 F6UZH7 168 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 SPRY3O43610 288 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 TMEM18Q96B42 140 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 PYGO2Q9BRQ0 406 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 HIPK2Q9H2X6 1198 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 SPTA1P02549 2419 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 OR10J4P0C629 311 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 GABRA6Q16445 453 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 HES3Q5TGS1 186 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 TGIF2LYQ8IUE0 185 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 ZDHHC11Q9H8X9 412 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 FKBP11Q9NYL4 201 aa13.92□□□□□ -0.18
SQLE-201ENST00000265896 KITLGP21583 273 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 PRDX2P32119 198 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 KCNIP4Q6PIL6 250 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 ZNF705AQ6ZN79 300 aaPredicted RBP13.91□□□□□ -0.18
SQLE-201ENST00000265896 MDS2Q8NDY4 140 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 OR4P4Q8NGL7 312 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 SFRP2Q96HF1 295 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 LURAP1Q96LR2 239 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 MS4A10Q96PG2 267 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 FAM90A26D6RGX4 464 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 C17orf112F2Z3M2 114 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 DUTP33316 252 aaKnown RBP13.91□□□□□ -0.18
SQLE-201ENST00000265896 ZNF90Q03938 601 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 C9orf106Q8NAJ2 232 aa13.91□□□□□ -0.18
SQLE-201ENST00000265896 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
SQLE-201ENST00000265896 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 SPINT2O43291 252 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 CGAP01215 116 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 TIMP3P35625 211 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 ZNF83P51522 516 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 RPL31P62899 125 aaKnown RBP13.9□□□□□ -0.18
SQLE-201ENST00000265896 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
SQLE-201ENST00000265896 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 UBALD2Q8IYN6 164 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 GCM1Q9NP62 436 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 PAM16Q9Y3D7 125 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 IQCF6A8MYZ5 107 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 RAB29O14966 203 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 MBP02144 154 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 IER3P46695 156 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 DOLPP1Q86YN1 238 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 OR5R1Q8NH85 324 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 TBX15Q96SF7 602 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 SNHG12Q9BXW3 62 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 TIMM9Q9Y5J7 89 aa13.9□□□□□ -0.18
SQLE-201ENST00000265896 CDKN1AP38936 164 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 RND1Q92730 232 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 IGKV1D-17A0A075B6S4 117 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 K7EN84 100 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 TCAPO15273 167 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 GGCTO75223 188 aaKnown RBP13.89□□□□□ -0.19
SQLE-201ENST00000265896 CA1P00915 261 aaPredicted RBP13.89□□□□□ -0.19
SQLE-201ENST00000265896 RAB4BP61018 213 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 GGTLC1Q9BX51 225 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
SQLE-201ENST00000265896 CEP295Q9C0D2 2601 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 IGFBP2P18065 325 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 TAS2R60P59551 318 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 SLC35E4Q6ICL7 350 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 GBGT1Q8N5D6 347 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 FDCSPQ8NFU4 85 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 ANAPC16Q96DE5 110 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms