RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ARFGEF3Q5TH69 2177 aa13.84□□□□□ -0.19
CHKA-201ENST00000265689 TNFRSF13BO14836 293 aaPredicted RBP13.84□□□□□ -0.19
CHKA-201ENST00000265689 CHRNB4P30926 498 aa13.84□□□□□ -0.19
CHKA-201ENST00000265689 SERF2P84101 59 aa13.84□□□□□ -0.19
CHKA-201ENST00000265689 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
CHKA-201ENST00000265689 SIAH2O43255 324 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 HBE1P02100 147 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 FBP1P09467 338 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 SPCS3P61009 180 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 MEF2CQ06413 473 aaPredicted RBP13.83□□□□□ -0.2
CHKA-201ENST00000265689 TFF3Q07654 80 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 ICAM4Q14773 271 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 CLDND2Q8NHS1 167 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
CHKA-201ENST00000265689 RCC1LQ96I51 464 aaKnown RBP13.83□□□□□ -0.2
CHKA-201ENST00000265689 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 HIPK2Q9H2X6 1198 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 CTSZQ9UBR2 303 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 FGF7P21781 194 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
CHKA-201ENST00000265689 TMEM41BQ5BJD5 291 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 RHOVQ96L33 236 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 C12orf57Q99622 126 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 GAL3ST2Q9H3Q3 398 aa13.83□□□□□ -0.2
CHKA-201ENST00000265689 CISD1Q9NZ45 108 aaKnown RBP13.83□□□□□ -0.2
CHKA-201ENST00000265689 TRAV1-1A0A0B4J248 108 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 CT45A6P0DMU7 189 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 CT45A5P0DMU8 189 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 CT45A7P0DMV0 189 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 GNLYP22749 145 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
CHKA-201ENST00000265689 RAB2AP61019 212 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 GNB2P62879 340 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 AWAT1Q58HT5 328 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 ZNF714Q96N38 554 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 NDUFB3O43676 98 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 SCAF4O95104 1147 aaKnown RBP13.82□□□□□ -0.2
CHKA-201ENST00000265689 IGKV1D-33P01593 117 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 IGKV1-33P01594 117 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
CHKA-201ENST00000265689 EFNB3Q15768 340 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 TMEM30BQ3MIR4 351 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 FBXL19-AS1Q494R0 122 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 OR4A47Q6IF82 309 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 ACSM6Q6P461 480 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 ADTRPQ96IZ2 230 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 RPS10P5Q9NQ39 176 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
CHKA-201ENST00000265689 GNG13Q9P2W3 67 aa13.82□□□□□ -0.2
CHKA-201ENST00000265689 TET2Q6N021 2002 aaPredicted RBP13.81□□□□□ -0.2
CHKA-201ENST00000265689 IGHV1-69-2A0A0G2JMI3 117 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 B9A039 149 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 M0R036 132 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 DVL1O14640 695 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 IFNA10P01566 189 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 SRP19P09132 144 aaKnown RBP13.81□□□□□ -0.2
CHKA-201ENST00000265689 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
CHKA-201ENST00000265689 CEBPGP53567 150 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 ZNF506Q5JVG8 444 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 ZNF787Q6DD87 383 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 OR52E5Q8NH55 327 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 MBD3L1Q8WWY6 194 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 SMDT1Q9H4I9 107 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 TIMM9Q9Y5J7 89 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 ARG1P05089 322 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 LRRC10Q5BKY1 277 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 SOHLH1Q5JUK2 328 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 AVPI1Q5T686 147 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 HEPN1Q6WQI6 88 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 CENPVQ7Z7K6 275 aaPredicted RBP13.81□□□□□ -0.2
CHKA-201ENST00000265689 TCF19Q9Y242 345 aa13.81□□□□□ -0.2
CHKA-201ENST00000265689 LYNX1G3V0Z9 82 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 RRHO14718 337 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 LYNX1P0DP58 116 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 DAOP14920 347 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 VWC2Q2TAL6 325 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 ABHD12Q8N2K0 398 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 RPP25LQ8N5L8 163 aaKnown RBP13.8□□□□□ -0.2
CHKA-201ENST00000265689 C7orf77A4D0Y5 90 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 C15orf61A6NNL5 157 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 IGKV1-16P04430 117 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 MYOD1P15172 320 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 CA5BP1Q8WTZ4 195 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 BBC3Q96PG8 261 aaPredicted RBP13.8□□□□□ -0.2
CHKA-201ENST00000265689 CLCC1Q96S66 551 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 BIN3Q9NQY0 253 aa13.8□□□□□ -0.2
CHKA-201ENST00000265689 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHKA-201ENST00000265689 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 COLCA2A8K830 154 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
CHKA-201ENST00000265689 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
CHKA-201ENST00000265689 ZNF429Q86V71 674 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 CYB561D1Q8N8Q1 229 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 OR10A7Q8NGE5 316 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 NPCDR1Q9BY65 106 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 SLC35D1Q9NTN3 355 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 LRRK2Q5S007 2527 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 LOC102723971A0A1B0GUV8 181 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 OR13D1Q8NGV5 346 aa13.79□□□□□ -0.2
CHKA-201ENST00000265689 TMEM170AQ8WVE7 144 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms