RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CORO2AQ92828 525 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 CALYQ9NYX4 217 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 SSC4DQ8WTU2 575 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 LSM10Q969L4 123 aaKnown RBP16.64■□□□□ 0.25
CSPG5-201ENST00000264723 NAT8BQ9UHF3 227 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 MALRD1Q5VYJ5 2156 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 CMTM2Q8TAZ6 248 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 ELOA3CA0A087WX78 387 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-201ENST00000264723 COX7A2P2O60397 106 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 IGLV3-1P01715 115 aa16.64■□□□□ 0.25
CSPG5-201ENST00000264723 HOXB1P14653 301 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-201ENST00000264723 ATP5G3P48201 142 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 PRB3Q04118 309 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-201ENST00000264723 PYY3Q5JQD4 70 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 RPP25LQ8N5L8 163 aaKnown RBP16.63■□□□□ 0.25
CSPG5-201ENST00000264723 MDS2Q8NDY4 140 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 OR10G8Q8NGN5 311 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 BTF3L4Q96K17 158 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 PXMP4Q9Y6I8 212 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CT45A1Q5HYN5 189 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 C10orf91Q5T1B1 145 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 ACP7Q6ZNF0 438 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 TGIF2LYQ8IUE0 185 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 TGIF2LXQ8IUE1 241 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CT45A3Q8NHU0 189 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 LINC01560Q8TB33 94 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 LPAR2Q9HBW0 351 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 PARD6AQ9NPB6 346 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 SOD3P08294 240 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 IER3P46695 156 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 DPPA3Q6W0C5 159 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 FAM216BQ8N7L0 139 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 ZBTB34Q8NCN2 500 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 CTDSP1Q9GZU7 261 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 GP6Q9HCN6 339 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 SDF2L1Q9HCN8 221 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 MANBALQ9NQG1 85 aa16.63■□□□□ 0.25
CSPG5-201ENST00000264723 J3QR06 171 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 SCGB2A1O75556 95 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 ORM2P19652 201 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 NPY1RP25929 384 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 KIR2DL2P43627 348 aaPredicted RBP16.62■□□□□ 0.25
CSPG5-201ENST00000264723 TNXAQ16473 311 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 MRPL54Q6P161 138 aaKnown RBP16.62■□□□□ 0.25
CSPG5-201ENST00000264723 DBX2Q6ZNG2 339 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 METRNQ9UJH8 293 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 TAS2R45P59539 299 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 CHRNB4P30926 498 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 PCSK4Q6UW60 755 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 ZNF835Q9Y2P0 537 aa16.62■□□□□ 0.25
CSPG5-201ENST00000264723 TRAV34A0A0B4J273 112 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 A0A1B0GV90 55 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 GFRA3O60609 400 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 ARL14EPLP0DKL9 152 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 SELLP14151 372 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 ASCL4Q6XD76 172 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 SPSB4Q96A44 273 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 RAB29O14966 203 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 KBTBD11O94819 623 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 GLRXP35754 106 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 KIAA1644Q3SXP7 199 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 TIMM23BQ5SRD1 257 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 GNB4Q9HAV0 340 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 UBE2G1P62253 170 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 CSPG4Q6UVK1 2322 aa16.61■□□□□ 0.25
CSPG5-201ENST00000264723 RBP4P02753 201 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 PAX9P55771 341 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 OR1P1Q8NH06 330 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 NPCDR1Q9BY65 106 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 CLCF1Q9UBD9 225 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 PLAUP00749 431 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 ZNF439Q8NDP4 499 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 OR4X1Q8NH49 305 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 FGF23Q9GZV9 251 aaPredicted RBP16.6■□□□□ 0.25
CSPG5-201ENST00000264723 CELSR3Q9NYQ7 3312 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 DKK1O94907 266 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 SUMO1P63165 101 aaKnown RBP16.6■□□□□ 0.25
CSPG5-201ENST00000264723 CRIP3Q6Q6R5 217 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 SIGLECL1Q8N7X8 197 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 BLNKQ8WV28 456 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 FLYWCH2Q96CP2 140 aaKnown RBP16.6■□□□□ 0.25
CSPG5-201ENST00000264723 SGK494Q96LW2 274 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 RHOBP62745 196 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 TXN2Q99757 166 aa16.6■□□□□ 0.25
CSPG5-201ENST00000264723 ZNF331Q9NQX6 463 aaPredicted RBP16.6■□□□□ 0.25
CSPG5-201ENST00000264723 ADAMTS9Q9P2N4 1935 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 NHLRC2Q8NBF2 726 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 PAM16Q9Y3D7 125 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 FOLR2P14207 255 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 GATA2P23769 480 aaPredicted RBP16.59■□□□□ 0.25
CSPG5-201ENST00000264723 GNG4P50150 75 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 ZNF497Q6ZNH5 498 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 ADTRPQ96IZ2 230 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 INSIG2Q9Y5U4 225 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 SS18L1O75177 396 aaPredicted RBP16.59■□□□□ 0.25
CSPG5-201ENST00000264723 HPRT1P00492 218 aa16.59■□□□□ 0.25
CSPG5-201ENST00000264723 CRISP2P16562 243 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms