RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 G6PCP35575 357 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 COMPP49747 757 aaPredicted RBP13.71□□□□□ -0.21
CTCF-201ENST00000264010 NMSQ5H8A3 153 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 UHRF2Q96PU4 802 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 NGBQ9NPG2 151 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 NKX6-3A6NJ46 265 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 C9JQL5 133 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 FCGR3BO75015 233 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 FOXF2Q12947 444 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 RNASEKQ6P5S7 137 aaKnown RBP13.71□□□□□ -0.21
CTCF-201ENST00000264010 PLSCR4Q9NRQ2 329 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 KIAA1456Q9P272 454 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 ROS1P08922 2347 aa13.71□□□□□ -0.22
CTCF-201ENST00000264010 NDUFS8O00217 210 aa13.71□□□□□ -0.22
CTCF-201ENST00000264010 ERVFRD-1P60508 538 aa13.71□□□□□ -0.22
CTCF-201ENST00000264010 TNFAIP6P98066 277 aaPredicted RBP13.71□□□□□ -0.22
CTCF-201ENST00000264010 MST1LQ2TV78 715 aa13.71□□□□□ -0.22
CTCF-201ENST00000264010 TPPP3Q9BW30 176 aa13.71□□□□□ -0.22
CTCF-201ENST00000264010 TRGV10A0A0A0MS01 117 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 A0A1B0GWJ7 208 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 FAM90A26D6RGX4 464 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 MGST3O14880 152 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 ZNF737O75373 536 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 GLIPR1P48060 266 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 RAB31Q13636 194 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 KIAA1644Q3SXP7 199 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 TMEM183AQ8IXX5 376 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
CTCF-201ENST00000264010 J3QR89 54 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 DIRC2Q96SL1 478 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 EGLN1Q9GZT9 426 aa13.7□□□□□ -0.22
CTCF-201ENST00000264010 RTP5Q14D33 572 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 TIMM23BQ5SRD1 257 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 OR2V2Q96R30 315 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 TMEM204Q9BSN7 226 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 DYNLRB1Q9NP97 96 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 NPIPB11E5RHQ5 1161 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 COX5AP20674 150 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 GFRALQ6UXV0 394 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 RAB37Q96AX2 223 aa13.69□□□□□ -0.22
CTCF-201ENST00000264010 INTS1Q8N201 2190 aaKnown RBP13.68□□□□□ -0.22
CTCF-201ENST00000264010 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
CTCF-201ENST00000264010 UNQ5815/PRO19632Q6UWF5 114 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 WDR82Q6UXN9 313 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 WDR31Q8NA23 367 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 R3HDM4Q96D70 268 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 ACTR3CQ9C0K3 210 aaPredicted RBP13.68□□□□□ -0.22
CTCF-201ENST00000264010 POLEQ07864 2286 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 CD5P06127 495 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 IER3P46695 156 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 SLC35E1Q96K37 410 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 RNF7Q9UBF6 113 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 ODAMA1E959 279 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
CTCF-201ENST00000264010 KLF2Q9Y5W3 355 aaPredicted RBP13.68□□□□□ -0.22
CTCF-201ENST00000264010 IGHV1-18A0A0C4DH31 117 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 CD99P14209 185 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 TNFRSF1AP19438 455 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 AMBPP02760 352 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 EGR1P18146 543 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 SERF2P84101 59 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 RSG1Q9BU20 258 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 RBKSQ9H477 322 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 ZNF71Q9NQZ8 489 aaPredicted RBP13.67□□□□□ -0.22
CTCF-201ENST00000264010 GAGE10A6NGK3 116 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 PSPNO60542 156 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 GYPAP02724 150 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 SSTR5P35346 364 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 GLRXP35754 106 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 STUMQ69YW2 141 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 WDR86Q86TI4 376 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 SFXN3Q9BWM7 321 aa13.67□□□□□ -0.22
CTCF-201ENST00000264010 K7N7A8 449 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 THBS3P49746 956 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 ABHD14AQ9BUJ0 271 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 APC2O95996 2303 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 ZNF207O43670 478 aaKnown RBP13.66□□□□□ -0.22
CTCF-201ENST00000264010 IGHV3-13P01766 116 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 IGHV3-7P01780 117 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 ERVK11-1P61568 191 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 CLN8Q9UBY8 286 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 KIR2DS2P43631 304 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 PLP1P60201 277 aa13.66□□□□□ -0.22
CTCF-201ENST00000264010 PNRC1Q12796 327 aaPredicted RBP13.66□□□□□ -0.22
CTCF-201ENST00000264010 MRPL54Q6P161 138 aaKnown RBP13.66□□□□□ -0.22
CTCF-201ENST00000264010 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms