RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PFDN1O60925 122 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 OR2A4O95047 310 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 MOSP00540 346 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 HRASP01112 189 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 FBP1P09467 338 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 TMEM11P17152 192 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 BRS3P32247 399 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 ERVK-16P61578 105 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 PSG5Q15238 335 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 LRRC37A5PQ49AS3 106 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 SPINK9Q5DT21 86 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 CXorf66Q5JRM2 361 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 FOXRED2Q8IWF2 684 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 ZBTB8BQ8NAP8 495 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 OR2T10Q8NGZ9 312 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 C2orf50Q96LR7 162 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 OR2A7Q96R45 310 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 MAGT1Q9H0U3 335 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 FBXL15Q9H469 300 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 PLSCR3Q9NRY6 295 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 NCBP2LA6PVI3 153 aaKnown RBP7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 FCN1O00602 326 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 SCGB1D2O95969 90 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 IGHV4-59P01825 116 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 OPN1MWP04001 364 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 FAM106CPP0CH98 169 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 TRAPPC2P0DI81 140 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 TRAPPC2BP0DI82 140 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 OPN1MW2P0DN77 364 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 OPN1MW3P0DN78 364 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 RELBQ01201 579 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 IL15RAQ13261 267 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 EBI3Q14213 229 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 SMCO1Q147U7 214 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 MMDQ15546 238 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 MRGPRG-AS1Q2M3A8 158 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 LRRC75BQ2VPJ9 315 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 PUSL1Q8N0Z8 303 aaKnown RBP7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 Q8N6K4 173 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 OR1S1Q8NH92 325 aa7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 QTRT1Q9BXR0 403 aaKnown RBP7.77□□□□□ -1.17
SNRNP40-201ENST00000263694 A0A1B0GU03 582 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 SH2D7A6NKC9 451 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 UPK2O00526 184 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 PITX3O75364 302 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 RBMXL2O75526 392 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 ATG12O94817 140 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 KBTBD11O94819 623 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 MBPP02686 304 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 CRYGBP07316 175 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 IL6RP08887 468 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 GIPP09681 153 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 LGALS7P47929 136 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 BPIFB3P59826 476 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 UBE2KP61086 200 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 RAB32Q13637 225 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 THOC7Q6I9Y2 204 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 C9orf139Q6ZV77 190 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 THNSL2Q86YJ6 484 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 SIGLECL1Q8N7X8 197 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 OR4D5Q8NGN0 318 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 OR2T35Q8NGX2 323 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 OR4A16Q8NH70 328 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 DUX5Q96PT3 197 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 TSNAXQ99598 290 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 LSM5Q9Y4Y9 91 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 TRAV14DV4A0A0A6YYC5 116 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 E7EUB6 86 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 G3V3Q6 166 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 H0YIZ8 118 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 RRHO14718 337 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 NBR2O15453 112 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 ST8SIA3O43173 380 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 KCNAB3O43448 404 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 IER3P46695 156 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 S100A10P60903 97 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 SRSF4Q08170 494 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 PLGLAQ15195 96 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 VMA21Q3ZAQ7 101 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 C10orf55Q5SWW7 151 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 NPBQ8NG41 125 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 NMES1Q9C002 83 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 BET1LQ9NYM9 111 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 SIGLEC9Q9Y336 463 aa7.76□□□□□ -1.17
SNRNP40-201ENST00000263694 A6NDX4 124 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 INAFM1C9JVW0 142 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 BOLA2-SMG1P6H3BVE0 249 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 HOXA3O43365 443 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 SNAPC5O75971 98 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 OR2F2O95006 317 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 FOSL1P15407 271 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 NKX2-1P43699 371 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 DYNLT3P51808 116 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms