RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 MKRN2OSH3BPM6 223 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 K7EN84 100 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 RAB29O14966 203 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 LINC00310P59036 64 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 COA6Q5JTJ3 125 aaKnown RBP13.69□□□□□ -0.22
ZNF541-201ENST00000263351 LRRC29Q8WV35 223 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 ABI3Q9P2A4 366 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 RNF114Q9Y508 228 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 PCNX1Q96RV3 2341 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 SPTBN2O15020 2390 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 ABCA1O95477 2261 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 C15orf65H3BRN8 121 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 TNFSF15O95150 251 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 GATA2P23769 480 aaPredicted RBP13.69□□□□□ -0.22
ZNF541-201ENST00000263351 DUTP33316 252 aaKnown RBP13.69□□□□□ -0.22
ZNF541-201ENST00000263351 CASP6P55212 293 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 GABRA6Q16445 453 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 VWC2Q2TAL6 325 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 HINT2Q9BX68 163 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 DUSP13Q9UII6 198 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 PDLIM4P50479 330 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 SOX8P57073 446 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 ACOT6Q3I5F7 207 aaPredicted RBP13.68□□□□□ -0.22
ZNF541-201ENST00000263351 SLC35E4Q6ICL7 350 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 NDUFAF3Q9BU61 184 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 PXMP4Q9Y6I8 212 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 POLEQ07864 2286 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 KLRC4-KLRK1H3BQV0 150 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 TGOLN2O43493 480 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 CECR9P0C854 216 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 GPR12P47775 334 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 ANAPC16Q96DE5 110 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 SFRP2Q96HF1 295 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 GGTLC1Q9BX51 225 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 MRPL37Q9BZE1 423 aaKnown RBP13.68□□□□□ -0.22
ZNF541-201ENST00000263351 ELOVL5Q9NYP7 299 aa13.68□□□□□ -0.22
ZNF541-201ENST00000263351 TIMP3P35625 211 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 CDKN1AP38936 164 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 ATP6V1FQ16864 119 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 TMEM144Q7Z5S9 345 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
ZNF541-201ENST00000263351 IGKV1D-17A0A075B6S4 117 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 A6NNC1 897 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 MBP02144 154 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 MLANAQ16655 118 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 WDR31Q8NA23 367 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 TMEM18Q96B42 140 aa13.67□□□□□ -0.22
ZNF541-201ENST00000263351 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
ZNF541-201ENST00000263351 VHLLQ6RSH7 139 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 CISD2Q8N5K1 135 aaKnown RBP13.66□□□□□ -0.22
ZNF541-201ENST00000263351 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 AKAP13Q12802 2813 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 F6UZH7 168 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 GFRA3O60609 400 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
ZNF541-201ENST00000263351 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
ZNF541-201ENST00000263351 ACY3Q96HD9 319 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 ZZEF1O43149 2961 aa13.66□□□□□ -0.22
ZNF541-201ENST00000263351 BSNQ9UPA5 3926 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 ZNF705FA8MVS1 300 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 ZNF705DP0CH99 300 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 ZNF705BP0CI00 300 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 WT1P19544 449 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 PDLIM3Q53GG5 364 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 UBALD2Q8IYN6 164 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 OR4A16Q8NH70 328 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 TAAR6Q96RI8 345 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 C17orf112F2Z3M2 114 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 TYMSP04818 313 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 PRDX2P32119 198 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 RPL31P62899 125 aaKnown RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 KRTCAP3Q53RY4 240 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 KCNIP4Q6PIL6 250 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 Q6ZWC4 215 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 C2orf88Q9BSF0 95 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 OPN3Q9H1Y3 402 aaPredicted RBP13.65□□□□□ -0.22
ZNF541-201ENST00000263351 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
ZNF541-201ENST00000263351 CGAP01215 116 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 CD46P15529 392 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 VDAC2P45880 294 aaPredicted RBP13.64□□□□□ -0.23
ZNF541-201ENST00000263351 MORN2Q502X0 79 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 MS4A10Q96PG2 267 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 ZDHHC11Q9H8X9 412 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 TCAPO15273 167 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 NKX2-8O15522 239 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 GCGP01275 180 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 IGFBP2P18065 325 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 TCL1AP56279 114 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 RELBQ01201 579 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms