RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 Q6ZSR6 202 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 SLC35E3Q7Z769 313 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 OOSP2Q86WS3 158 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 Q8N9W7 124 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 OR2T4Q8NH00 348 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 OR1S1Q8NH92 325 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 RXFP2Q8WXD0 754 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 MIEN1Q9BRT3 115 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ANAPC13Q9BS18 74 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 EMC6Q9BV81 110 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ULBP3Q9BZM4 244 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 OR2D2Q9H210 308 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 IFI27L2Q9H2X8 130 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 BOKQ9UMX3 212 aaPredicted RBP2.79□□□□□ -1.96
CCDC54-201ENST00000261058 LRP4O75096 1905 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ARHGEF11O15085 1522 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 CHD2O14647 1828 aaKnown RBP2.79□□□□□ -1.96
CCDC54-201ENST00000261058 MYH2Q9UKX2 1941 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 H7C1C5 153 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 UPK2O00526 184 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF207O43670 478 aaKnown RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR2T1O43869 369 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 IGHG2P01859 326 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 PMP2P02689 132 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 GKN3PP0CG01 181 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 AKAIN1P0CW23 69 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 IGHV3-43DP0DP04 118 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 BLVRBP30043 206 aaPredicted RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 AKR1C2P52895 323 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 H2BFSP57053 126 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 LCN6P62502 163 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 HOXC5Q00444 222 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 PSG9Q00887 426 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 BATFQ16520 125 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 IQCJQ1A5X6 159 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 GLT8D1Q68CQ7 371 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 GOLT1AQ6ZVE7 132 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 H2AFVQ71UI9 128 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 MMGT1Q8N4V1 131 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 C11orf72Q8NBR9 251 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 BPIFB6Q8NFQ5 453 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR8D4Q8NGM9 314 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR10D3Q8NH80 312 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR1L1Q8NH94 360 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 MFSD8Q8NHS3 518 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 JOSD2Q8TAC2 188 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF431Q8TF32 576 aaPredicted RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 PP6455Q8WZ26 134 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 MRPS24Q96EL2 167 aaKnown RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 ACY3Q96HD9 319 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 TEX37Q96LM6 180 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 TRIB3Q96RU7 358 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR8D2Q9GZM6 311 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 GTSF1LQ9H1H1 148 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 MED28Q9H204 178 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR51E2Q9H255 320 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR51I2Q9H344 312 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OR5AC2Q9NZP5 309 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF629Q9UEG4 869 aaPredicted RBP2.78□□□□□ -1.96
CCDC54-201ENST00000261058 PCYOX1Q9UHG3 505 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 ORC6Q9Y5N6 252 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 CAMTA1Q9Y6Y1 1673 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 OVOS2A0A0G2JMS6 1433 aa2.78□□□□□ -1.96
CCDC54-201ENST00000261058 TRAV8-2A0A0B4J237 113 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 A0A1B0GXF2 115 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 FAM183AA6NL82 134 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 C9JAW5 83 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 PSPHP1O15172 72 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 MAS1P04201 325 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 HLA-DQB2P05538 268 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 EIF4EP06730 217 aaKnown RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 SCTP09683 121 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 RPL7P18124 248 aaKnown RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 PRTN3P24158 256 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 REG1BP48304 166 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 RPS21P63220 83 aaKnown RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 MEF2BQ02080 365 aaPredicted RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF266Q14584 549 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 CCL15Q16663 113 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 GKN2Q86XP6 184 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 YIPF7Q8N8F6 280 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 ZFP41Q8N8Y5 198 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM229BQ8NBD8 167 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 OR11H6Q8NGC7 330 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 OR10AD1Q8NGE0 317 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 FAM3DQ96BQ1 224 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 FMC1Q96HJ9 113 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 LINC00477Q96M19 166 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 ERMAPQ96PL5 475 aaPredicted RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 TSPAN32Q96QS1 320 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 METTL26Q96S19 204 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 OR2H1Q9GZK4 316 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 OR52D1Q9H346 318 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms