RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ERVK-16P61578 105 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 VMA21Q3ZAQ7 101 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 NOXA1Q86UR1 476 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 PUSL1Q8N0Z8 303 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 OR8H1Q8NGG4 311 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 PHB2Q99623 299 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 TMEM140Q9NV12 185 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 METTL1Q9UBP6 276 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 NIPBLQ6KC79 2804 aaeCLIP12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 A0A0B4J2A0 478 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 AMY1AP04745 511 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 P0C879 139 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 AKR1C2P52895 323 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 C5orf56Q8N8D9 126 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 UXS1Q8NBZ7 420 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 C1RLQ9NZP8 487 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 SHPKQ9UHJ6 478 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 SIGLEC9Q9Y336 463 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 CLDN34H7C241 214 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 ADAP1O75689 374 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 OR2A4O95047 310 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 IL6RP08887 468 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 C5orf64Q2M2E5 130 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 C16orf82Q7Z2V1 217 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 AIFM2Q9BRQ8 373 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 GON7Q9BXV9 100 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 OR51J1Q9H342 316 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 BET1LQ9NYM9 111 aa12.57□□□□□ -0.4
CCDC90B-201ENST00000260054 TRAV3A0A0B4J244 114 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 FGF16O43320 207 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 ATG12O94817 140 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 KBTBD11O94819 623 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 HOXB5P09067 269 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 OR9G9P0C7N8 305 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 VDAC1P21796 283 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 PJVKQ0ZLH3 352 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 H2BFWTQ7Z2G1 175 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 TEX45Q8NA69 505 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 VSTM2AQ8TAG5 236 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
CCDC90B-201ENST00000260054 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 FCN1O00602 326 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 GPR137BO60478 399 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 UBA52P62987 128 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 PLGLAQ15195 96 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 C2orf68Q2NKX9 166 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 GGNBP1Q5YKI7 109 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 Q6ZRM9 215 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 TMEM167AQ8TBQ9 72 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 NSG2Q9Y328 171 aa12.55□□□□□ -0.4
CCDC90B-201ENST00000260054 TNCP24821 2201 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 TCF21O43680 179 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 JMJD8Q96S16 334 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 RASL11BQ9BPW5 248 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 ZNF430Q9H8G1 570 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 M0QZK8 103 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 UPK2O00526 184 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 CCSO14618 274 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 PLXNB1O43157 2135 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 SSNA1O43805 119 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 RNASE1P07998 156 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 BLCAPP62952 87 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 RELBQ01201 579 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 OR4A5Q8NH83 315 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 RANBP3Q9H6Z4 567 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 RAB18Q9NP72 206 aa12.54□□□□□ -0.4
CCDC90B-201ENST00000260054 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 CA2P00918 260 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 OR2B8PP59922 312 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 SSBP2P81877 361 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 SRSF2Q01130 221 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 PRSS8Q16651 343 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 Q6ZS46 218 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 CACNG5Q9UF02 275 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 NF1P21359 2839 aa12.53□□□□□ -0.4
CCDC90B-201ENST00000260054 MYOD1P15172 320 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms