RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 NEURL2Q9BR09 285 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 RBKSQ9H477 322 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 BET1LQ9NYM9 111 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 GPR132Q9UNW8 380 aa11.23□□□□□ -0.61
PRPF38A-201ENST00000257181 PKIAP61925 76 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 FLVCR2Q9UPI3 526 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 KNTC1P50748 2209 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV2-70DA0A0C4DH43 119 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 MELTFP08582 738 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 LCN12Q6JVE5 192 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 SELENOHQ8IZQ5 122 aaKnown RBP11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 TCAPO15273 167 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF345Q14585 488 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 HIST3H3Q16695 136 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 WDR89Q96FK6 387 aaPredicted RBP11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 TMEM189A5PLL7 270 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 ZNF137PP52743 207 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 CR1LQ2VPA4 569 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 UPK2O00526 184 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 OR2J3O76001 311 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 LYPD3O95274 346 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 CD74P04233 296 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 CD69Q07108 199 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 FBXL15Q9H469 300 aa11.21□□□□□ -0.61
PRPF38A-201ENST00000257181 ANKRD12Q6UB98 2062 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 GPX1P07203 203 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 LHFPL5Q8TAF8 219 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 MRPL20Q9BYC9 149 aaKnown RBP11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 ISLRO14498 428 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 WNT5AP41221 380 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 BPESC1Q9GZL8 116 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 ZNF586Q9NXT0 402 aa11.21□□□□□ -0.62
PRPF38A-201ENST00000257181 TRBV6-6A0A0A6YYG2 114 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 BAK1Q16611 211 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 SMUG1Q53HV7 270 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 H3BUA1 57 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 TFPI2P48307 235 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 Q6ZNX1 250 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 TRBV6-7A0A0A0MS04 114 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 H0YL77 283 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 OVOL1O14753 267 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 NOL4LQ96MY1 436 aaPredicted RBP11.2□□□□□ -0.62
PRPF38A-201ENST00000257181 TRGV11A0A075B6L2 103 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 MORN2Q502X0 79 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 PRSS57Q6UWY2 283 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 DMRTA2Q96SC8 542 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 TMA7Q9Y2S6 64 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 RFLNBQ8N5W9 214 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 OR10S1Q8NGN2 331 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 OR52E5Q8NH55 327 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 ADAM10O14672 748 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 NPBWR2P48146 333 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 RANP62826 216 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 A0A1B0GTI1 187 aa11.19□□□□□ -0.62
PRPF38A-201ENST00000257181 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 MEX3AA1L020 520 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 A8MWL6 223 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 TNFSF13O75888 250 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 OR2C1O95371 312 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 FAM74A7A6NL05 159 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 IGLV1-44P01699 117 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 RPS11P62280 158 aaKnown RBP eCLIP11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 OR51M1Q9H341 326 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms