RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 VDAC2P45880 294 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 ADIPOQQ15848 244 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 OR51G1Q8NGK1 321 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 C1QTNF5Q9BXJ0 243 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 H3BTX0 84 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 PKIAP61925 76 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 HIST1H1AQ02539 215 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 CD200R1LQ6Q8B3 271 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 ARPC1AQ92747 370 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 TP53RKQ96S44 253 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 CELA3BP08861 270 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 SRSF12Q8WXF0 261 aaKnown RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 SPSB4Q96A44 273 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 TM2D1Q9BX74 207 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 A0A087X0M5 115 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 A0A1B0GX30 115 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 GDF9O60383 454 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 LHX2P50458 406 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 NRN1LQ496H8 165 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 SPATA45Q537H7 98 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 RNASE6Q93091 150 aaKnown RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 FOXI3A8MTJ6 420 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 IGKV3-20P01619 116 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 IL4P05112 153 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 FAM90A1Q86YD7 464 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 MDKP21741 143 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-201ENST00000254630 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 IGKV1D-43A0A0B4J1Z2 117 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 MT-ND6P03923 174 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 NABP2Q9BQ15 211 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 CBLN4Q9NTU7 201 aa7.38□□□□□ -1.23
PTCD3-201ENST00000254630 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 CRYBB3P26998 211 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 MEF2BQ02080 365 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FAM201AQ5SY85 155 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 COLCA1Q6ZS62 124 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 NEU1Q99519 415 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 A6NJY4 79 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 ZXDCQ2QGD7 858 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FAM74A4Q5TZK3 123 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 OR4X2Q8NGF9 303 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 NRIP2Q9BQI9 281 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 SPRR3Q9UBC9 169 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FBXL7Q9UJT9 491 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 H7C2G1 150 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 GCHFRP30047 84 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 ABLIM2Q6H8Q1 611 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 NPIPB3Q92617 1050 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 SMIM6P0DI80 62 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 GOLT1AQ6ZVE7 132 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 MRPL20Q9BYC9 149 aaKnown RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FOXA2Q9Y261 457 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-201ENST00000254630 KBTBD11-OT1A0A1B0GTJ5 212 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 CDKN1AP38936 164 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 C2orf83Q53S99 150 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FAM216BQ8N7L0 139 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 FBXL15Q9H469 300 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 S4R3C0 116 aa7.37□□□□□ -1.23
PTCD3-201ENST00000254630 OR4A47Q6IF82 309 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 PEMTQ9UBM1 199 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 KLF4O43474 513 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 HLA-DQA1P01909 254 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 OR13A1Q8NGR1 328 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 SFRP2Q96HF1 295 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 IMMP1LQ96LU5 166 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 HLA-DRB1P01911 266 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 MEF2CQ06413 473 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 ITLN2Q8WWU7 325 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 AICDAQ9GZX7 198 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 PQLC2LA1A4F0 135 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 PPP1R17O96001 155 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 ZNF660Q6AZW8 331 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 DUX3Q96PT4 197 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 HSPB9Q9BQS6 159 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 IFI27L2Q9H2X8 130 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 DPM3Q9P2X0 92 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 SCN5AQ14524 2016 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 ZNF250P15622 560 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 ZNF25P17030 456 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 RNASE4P34096 147 aaKnown RBP7.36□□□□□ -1.23
PTCD3-201ENST00000254630 UQCRFS1P47985 274 aa7.36□□□□□ -1.23
PTCD3-201ENST00000254630 CFHR1Q03591 330 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms