RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 OR8I2Q8N0Y5 310 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 TSKUQ8WUA8 353 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 RCHY1Q96PM5 261 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 SMPXQ9UHP9 88 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 CDIPTO14735 213 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 MT-CO2P00403 227 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 DEFA4P12838 97 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 AREGP15514 252 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 FOXL2P58012 376 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 RPL31P62899 125 aaKnown RBP17.1■□□□□ 0.33
RARA-201ENST00000254066 SCCPDHQ8NBX0 429 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 HES4Q9HCC6 221 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 ARL2-SNX15V9GYD0 113 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 RTTNQ86VV8 2226 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 DOCK11Q5JSL3 2073 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 C9orf172C9J069 976 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 SP9P0CG40 484 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 ARR3P36575 388 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 SMIM21Q3B7S5 101 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 Q6ZVH6 145 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 ZNF439Q8NDP4 499 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 TNRC6BQ9UPQ9 1833 aaKnown RBP17.09■□□□□ 0.33
RARA-201ENST00000254066 H0YJW9 148 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 DUX1O43812 170 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 TOX4O94842 621 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 AMY1AP04745 511 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 SLAQ13239 276 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 NRN1LQ496H8 165 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 OSTCQ9NRP0 149 aa17.09■□□□□ 0.33
RARA-201ENST00000254066 J3QR06 171 aa17.08■□□□□ 0.33
RARA-201ENST00000254066 LINC00869P0C866 280 aa17.08■□□□□ 0.33
RARA-201ENST00000254066 CLDN18P56856 261 aa17.08■□□□□ 0.33
RARA-201ENST00000254066 CLEC7AQ9BXN2 247 aa17.08■□□□□ 0.33
RARA-201ENST00000254066 KCNIP1Q9NZI2 227 aa17.08■□□□□ 0.33
RARA-201ENST00000254066 A0A0J9YW62 118 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 LMO7DNF2Z398 122 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 CLDN14O95500 239 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 CFHR1Q03591 330 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 FAM58AQ8N1B3 248 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 ZNF645Q8N7E2 425 aa17.08■□□□□ 0.32
RARA-201ENST00000254066 A0A1B0GV72 72 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 K7ERU9 68 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 BMPR1BO00238 502 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 G6PCP35575 357 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 CATR1Q13166 79 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 TBR1Q16650 682 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 LDLRAD2Q5SZI1 272 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 WDR31Q8NA23 367 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 FGFBP3Q8TAT2 258 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 DEFB126Q9BYW3 111 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 ZNF891A8MT65 544 aaPredicted RBP17.07■□□□□ 0.32
RARA-201ENST00000254066 M0QZ24 198 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 SYNGR1O43759 233 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 LIFP15018 202 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 SRIP30626 198 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 EDDM3BP56851 147 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 GCSAMLQ5JQS6 135 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 AAED1Q7RTV5 226 aa17.07■□□□□ 0.32
RARA-201ENST00000254066 TNRC6AQ8NDV7 1962 aaKnown RBP17.06■□□□□ 0.32
RARA-201ENST00000254066 C15orf62A8K5M9 175 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 ZIC3O60481 467 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 FRMD6-AS1P0C7T7 363 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 CEACAM16Q2WEN9 425 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 DEFB133Q30KQ1 61 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 RASL11AQ6T310 242 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 OR2D2Q9H210 308 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 YTHDF2Q9Y5A9 579 aaKnown RBP17.06■□□□□ 0.32
RARA-201ENST00000254066 ZNF497Q6ZNH5 498 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 ASCL5Q7RTU5 278 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 SRXN1Q9BYN0 137 aa17.06■□□□□ 0.32
RARA-201ENST00000254066 MBNL3Q9NUK0 354 aaKnown RBP17.06■□□□□ 0.32
RARA-201ENST00000254066 C19orf25Q9UFG5 118 aaPredicted RBP17.06■□□□□ 0.32
RARA-201ENST00000254066 GLB1P16278 677 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 GCHFRP30047 84 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 EIF4EBP1Q13541 118 aaPredicted RBP17.05■□□□□ 0.32
RARA-201ENST00000254066 MRPL21Q7Z2W9 205 aaKnown RBP17.05■□□□□ 0.32
RARA-201ENST00000254066 OR8B3Q8NGG8 313 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 ZDHHC16Q969W1 377 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 OR8B2Q96RD0 313 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 PKIBQ9C010 78 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 ARHGAP21Q5T5U3 1957 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 KIAA1549Q9HCM3 1950 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 G3V3Y1 287 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 TMPRSS3P57727 454 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 PDLIM3Q53GG5 364 aaPredicted RBP17.05■□□□□ 0.32
RARA-201ENST00000254066 PET117Q6UWS5 81 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 ZNF479Q96JC4 524 aa17.05■□□□□ 0.32
RARA-201ENST00000254066 ZNF716A6NP11 495 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 TRAPPC2LQ9UL33 140 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 WDFY4Q6ZS81 3184 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 ISLRO14498 428 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 RAMP3O60896 148 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 IGLL1P15814 213 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 NTF4P34130 210 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 SPATA46Q5T0L3 261 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 Q6P435 159 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 H2BFWTQ7Z2G1 175 aa17.04■□□□□ 0.32
RARA-201ENST00000254066 ST20Q9HBF5 79 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms