RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PLAUP00749 431 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 SRD5A2P31213 254 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 ADMP35318 185 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 SOX8P57073 446 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 ICAM4Q14773 271 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 TMEM170BQ5T4T1 132 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 NABP2Q9BQ15 211 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 A0A1B0GW15 77 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 OR2H1Q9GZK4 316 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 R4GN57 208 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 IGHV5-51A0A0C4DH38 117 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 K7N7A8 449 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 DLL1O00548 723 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 COX7A1P24310 79 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 OR9G4Q8NGQ1 327 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZG16O60844 167 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 DLX6P56179 175 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 SPEM2Q0P670 501 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 TET1Q8NFU7 2136 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 LOXL2Q9Y4K0 774 aa11.29□□□□□ -0.6
PCDHGA3-201ENST00000253812 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 FAM157AC9JC47 383 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 GFRA1P56159 465 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 GUSBP11Q6P575 273 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZNF488Q96MN9 340 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 LYZL6O75951 148 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 SRSF5Q13243 272 aaKnown RBP11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZNF645Q8N7E2 425 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 FOXC2Q99958 501 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 RSPO3Q9BXY4 272 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 EP400Q96L91 3159 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 PAX2Q02962 417 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 SVILO95425 2214 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 IGHV1-69-2A0A0G2JMI3 117 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 TGFAP01135 160 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 BTCP35070 178 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 DNM1P46Q6ZS02 220 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
PCDHGA3-201ENST00000253812 TRGV5A0A0B4J1U4 118 aa11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 ZNF585BQ52M93 769 aa11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 BHLHA15Q7RTS1 189 aaPredicted RBP11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 SEMA5BQ9P283 1151 aa11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.6
PCDHGA3-201ENST00000253812 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 AMELYQ99218 206 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 HOXA3O43365 443 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 Q6AWC8 147 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 MRAP2Q96G30 205 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 FAM60AQ9NP50 221 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 IGHV1OR21-1A0A087WYE8 117 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 A0A0G2JK05 382 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 ZNF658BQ4V348 819 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 TIMP4Q99727 224 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
PCDHGA3-201ENST00000253812 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 A8MWP6 167 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 HOXC4P09017 264 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 TSPOP30536 169 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 ZP4Q12836 540 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 SYT8Q8NBV8 401 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 CLEC1BQ9P126 229 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 C1QCP02747 245 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 CXCL1P09341 107 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 RND2P52198 227 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 RNF126Q9BV68 326 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 GREM1O60565 184 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 PSG1P11464 419 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 NXPH1P58417 271 aa11.26□□□□□ -0.61
PCDHGA3-201ENST00000253812 C10orf128Q5T292 105 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms