RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CDKN1AP38936 164 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 AMTP48728 403 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 Q6P435 159 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 OR5R1Q8NH85 324 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 NOL4LQ96MY1 436 aaPredicted RBP10.01□□□□□ -0.81
USHBP1-201ENST00000252597 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
USHBP1-201ENST00000252597 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
USHBP1-201ENST00000252597 FOXH1O75593 365 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 IL18BPO95998 194 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 GCGP01275 180 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 RPL31P62899 125 aaKnown RBP10.01□□□□□ -0.81
USHBP1-201ENST00000252597 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 COLCA1Q6ZS62 124 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 ZNF645Q8N7E2 425 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 FOXJ2Q9P0K8 574 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 POLR3KQ9Y2Y1 108 aaPredicted RBP10.01□□□□□ -0.81
USHBP1-201ENST00000252597 TMEM250H0YL14 139 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 CLDN14O95500 239 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 NUTF2P61970 127 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 TMEM164Q5U3C3 297 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 TMEM14EPQ6UXP3 125 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 ZNF497Q6ZNH5 498 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 SIGLECL1Q8N7X8 197 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 UHRF2Q96PU4 802 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 SSBP3Q9BWW4 388 aaPredicted RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 MS4A5Q9H3V2 200 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 IGF2RP11717 2491 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 SPINT2O43291 252 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 APELAP0DMC3 54 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 IRF2P14316 349 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 SPCS3P61009 180 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 PSG5Q15238 335 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 MRPL37Q9BZE1 423 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 TOX4O94842 621 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 DHRS13Q6UX07 377 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 MOB3BQ86TA1 216 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 CISD2Q8N5K1 135 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 ST6GALNAC3Q8NDV1 305 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 LRRC29Q8WV35 223 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 ACY3Q96HD9 319 aa10□□□□□ -0.81
USHBP1-201ENST00000252597 RNASE7Q9H1E1 156 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
USHBP1-201ENST00000252597 NCOR2Q9Y618 2525 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 CGAP01215 116 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 CRYBB3P26998 211 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 Q6ZSR3 168 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 GBGT1Q8N5D6 347 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 A8MXE2 369 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 PLAUP00749 431 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 TNFSF10P50591 281 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 SSPNQ14714 243 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 FBXW9Q5XUX1 488 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 Q6ZR03 302 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 KLF14Q8TD94 323 aaPredicted RBP9.99□□□□□ -0.81
USHBP1-201ENST00000252597 C5orf30Q96GV9 206 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 NCKAP5O14513 1909 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 MUC6Q6W4X9 2439 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.99□□□□□ -0.81
USHBP1-201ENST00000252597 SPRY3O43610 288 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 TCF21O43680 179 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 WISP2O76076 250 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 NPSP0C0P6 89 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 OR10J1P30954 320 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 TIMP3P35625 211 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 CCL11P51671 97 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 ACTL10Q5JWF8 245 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 Q6ZVH6 145 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 LYG1Q8N1E2 194 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 RND1Q92730 232 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 CIB3Q96Q77 187 aaPredicted RBP9.99□□□□□ -0.81
USHBP1-201ENST00000252597 SH2D2AQ9NP31 389 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
USHBP1-201ENST00000252597 EXPH5Q8NEV8 1989 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 TRBV20OR9-2A0A075B6H5 130 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 ZNF253O75346 499 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 CCKARP32238 428 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 CAMPP49913 170 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 TPPP2P59282 170 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 DCAF10Q5QP82 559 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 PQLC2Q6ZP29 291 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 OR5AU1Q8NGC0 362 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 S1PR3Q99500 378 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 C2orf88Q9BSF0 95 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 ARRDC1-AS1Q9H2J1 176 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 CLCF1Q9UBD9 225 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 TRGV5A0A0B4J1U4 118 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
USHBP1-201ENST00000252597 MLANAQ16655 118 aa9.98□□□□□ -0.81
USHBP1-201ENST00000252597 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms