RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RPS16P62249 146 aaKnown RBP14.13□□□□□ -0.15
FOXA1-201ENST00000250448 RPL30P62888 115 aaKnown RBP14.13□□□□□ -0.15
FOXA1-201ENST00000250448 ZNF709Q8N972 641 aa14.13□□□□□ -0.15
FOXA1-201ENST00000250448 ZBTB34Q8NCN2 500 aa14.13□□□□□ -0.15
FOXA1-201ENST00000250448 FZR1Q9UM11 496 aa14.13□□□□□ -0.15
FOXA1-201ENST00000250448 POLDIP2Q9Y2S7 368 aa14.13□□□□□ -0.15
FOXA1-201ENST00000250448 S1PR2O95136 353 aa14.13□□□□□ -0.15
FOXA1-201ENST00000250448 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
FOXA1-201ENST00000250448 ROS1P08922 2347 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 A0A0G2JNJ9 132 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CIDEAO60543 219 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 NXPH2O95156 264 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 RAB4AP20338 218 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CCKARP32238 428 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 TIMP3P35625 211 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 FAM27E3Q08E93 113 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 PRSS8Q16651 343 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 MRPL41Q8IXM3 137 aaKnown RBP14.12□□□□□ -0.15
FOXA1-201ENST00000250448 ZNF808Q8N4W9 903 aaPredicted RBP14.12□□□□□ -0.15
FOXA1-201ENST00000250448 OR5T1Q8NG75 326 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 OR1L1Q8NH94 360 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 Q9UFV3 132 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 POLEQ07864 2286 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 C11orf94C9JXX5 98 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 SH2D1BO14796 132 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CECR9P0C854 216 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CHRNA7P36544 502 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 GNB2P62879 340 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 VWC2Q2TAL6 325 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 C22orf34Q6ZV56 151 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 ZDHHC16Q969W1 377 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 KCNIP1Q9NZI2 227 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 DEFA4P12838 97 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 NPPCP23582 126 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CEACAM8P31997 349 aaPredicted RBP14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CDC34P49427 236 aaPredicted RBP14.12□□□□□ -0.15
FOXA1-201ENST00000250448 PPP1CBP62140 327 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 CATR1Q13166 79 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 EIF4EBP1Q13541 118 aaPredicted RBP14.12□□□□□ -0.15
FOXA1-201ENST00000250448 ZNF146Q15072 292 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 ATG101Q9BSB4 218 aa14.12□□□□□ -0.15
FOXA1-201ENST00000250448 MLNRO43193 412 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 IL3RAP26951 378 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 OR3A1P47881 315 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 ZNF83P51522 516 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 CNN1P51911 297 aaKnown RBP14.11□□□□□ -0.15
FOXA1-201ENST00000250448 LCN2P80188 198 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 FAM78BQ5VT40 261 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 SLC25A40Q8TBP6 338 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 ACACBO00763 2458 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 C17orf112F2Z3M2 114 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 IQCJQ1A5X6 159 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 GBGT1Q8N5D6 347 aa14.11□□□□□ -0.15
FOXA1-201ENST00000250448 CIB3Q96Q77 187 aaPredicted RBP14.11□□□□□ -0.15
FOXA1-201ENST00000250448 TMEM30CPA0ZSE6 113 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 C17orf98A8MV24 154 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 CDIPTO14735 213 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 EREGO14944 169 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 IGKV3-15P01624 115 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 OR4A8P0C604 315 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 LY6DQ14210 128 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 MPV17P39210 176 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 CEBPDP49716 269 aaPredicted RBP14.1□□□□□ -0.15
FOXA1-201ENST00000250448 LINC01551Q86U37 167 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 C1orf162Q8NEQ5 155 aaPredicted RBP14.1□□□□□ -0.15
FOXA1-201ENST00000250448 OR52L2PQ8NGH6 319 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 GALMQ96C23 342 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
FOXA1-201ENST00000250448 IGHV1-18A0A0C4DH31 117 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 C12orf77C9JDV5 145 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 RAB29O14966 203 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 CLDN14O95500 239 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 HAND1O96004 215 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 RPL15P61313 204 aaKnown RBP14.09□□□□□ -0.15
FOXA1-201ENST00000250448 PAX5Q02548 391 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 FAM53AQ6NSI3 398 aaPredicted RBP14.09□□□□□ -0.15
FOXA1-201ENST00000250448 DOCK11Q5JSL3 2073 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 CRYAAP02489 173 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 CD99P14209 185 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 SELEP16581 610 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 BRWD1-AS2P59051 145 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 GNB1P62873 340 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 SPINK9Q5DT21 86 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 DIRC2Q96SL1 478 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 PLCE1Q9P212 2302 aa14.09□□□□□ -0.15
FOXA1-201ENST00000250448 EGR1P18146 543 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 MRPL49Q13405 166 aaKnown RBP14.08□□□□□ -0.15
FOXA1-201ENST00000250448 BTNL3Q6UXE8 466 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 H2BFWTQ7Z2G1 175 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 WFIKKN1Q96NZ8 548 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 SFXN3Q9BWM7 321 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 SLC25A15Q9Y619 301 aa14.08□□□□□ -0.15
FOXA1-201ENST00000250448 TMPRSS2O15393 492 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 PDE6DO43924 150 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 PSPNO60542 156 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 RBMXL2O75526 392 aaKnown RBP14.08□□□□□ -0.16
FOXA1-201ENST00000250448 NUTF2P61970 127 aaKnown RBP14.08□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM144Q7Z5S9 345 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 USF3Q68DE3 2245 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 A0A0U1RQK1 487 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms